RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C YBR255C-AQ3E776 120 aa4.53□□□□□ -1.68
SCM3YDL139C YLR099W-AQ3E798 87 aa4.53□□□□□ -1.68
SCM3YDL139C BRR1Q99177 341 aaPredicted RBP4.53□□□□□ -1.68
SCM3YDL139C TRA1P38811 3744 aa4.53□□□□□ -1.68
SCM3YDL139C OPI3P05375 206 aa4.52□□□□□ -1.69
SCM3YDL139C ADK1P07170 222 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C ARF1P11076 181 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C ERG24P32462 438 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C PAD1P33751 242 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
SCM3YDL139C TEF4P36008 412 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C APD1P38281 316 aa4.52□□□□□ -1.69
SCM3YDL139C OM14P38325 134 aa4.52□□□□□ -1.69
SCM3YDL139C MTC4P38335 694 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C YHR035WP38769 630 aa4.52□□□□□ -1.69
SCM3YDL139C NSG1P38837 291 aa4.52□□□□□ -1.69
SCM3YDL139C NVJ1P38881 321 aa4.52□□□□□ -1.69
SCM3YDL139C UME6P39001 836 aa4.52□□□□□ -1.69
SCM3YDL139C YJL055WP47044 245 aa4.52□□□□□ -1.69
SCM3YDL139C RPS12P48589 143 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C IMD3P50095 523 aaKnown RBP4.52□□□□□ -1.69
SCM3YDL139C PFA5Q03289 374 aa4.52□□□□□ -1.69
SCM3YDL139C DML1Q03652 475 aa4.52□□□□□ -1.69
SCM3YDL139C EKI1Q03764 534 aa4.52□□□□□ -1.69
SCM3YDL139C COA4Q05809 96 aa4.52□□□□□ -1.69
SCM3YDL139C NEJ1Q06148 342 aa4.52□□□□□ -1.69
SCM3YDL139C YDL242WQ07746 117 aa4.52□□□□□ -1.69
SCM3YDL139C YDR061WQ12298 539 aa4.52□□□□□ -1.69
SCM3YDL139C FLO9P39712 1322 aa4.51□□□□□ -1.69
SCM3YDL139C RNP1P32385 249 aa4.51□□□□□ -1.69
SCM3YDL139C ZUO1P32527 433 aaKnown RBP4.51□□□□□ -1.69
SCM3YDL139C YOR062CP36025 268 aa4.51□□□□□ -1.69
SCM3YDL139C COS9P36034 407 aa4.51□□□□□ -1.69
SCM3YDL139C RCN1P36054 211 aa4.51□□□□□ -1.69
SCM3YDL139C DTR1P38125 572 aa4.51□□□□□ -1.69
SCM3YDL139C RPS20P38701 121 aaKnown RBP4.51□□□□□ -1.69
SCM3YDL139C IPI1P38803 334 aaPredicted RBP4.51□□□□□ -1.69
SCM3YDL139C MDM31P38880 579 aa4.51□□□□□ -1.69
SCM3YDL139C YER010CP40011 234 aa4.51□□□□□ -1.69
SCM3YDL139C YIL169CP40442 995 aa4.51□□□□□ -1.69
SCM3YDL139C HXT9P40885 567 aa4.51□□□□□ -1.69
SCM3YDL139C YAE1P47118 141 aaPredicted RBP4.51□□□□□ -1.69
SCM3YDL139C AAD10P47182 288 aa4.51□□□□□ -1.69
SCM3YDL139C HXT11P54862 567 aa4.51□□□□□ -1.69
SCM3YDL139C SNX41Q04053 625 aa4.51□□□□□ -1.69
SCM3YDL139C SEC13Q04491 297 aaKnown RBP4.51□□□□□ -1.69
SCM3YDL139C SNO4Q04902 237 aa4.51□□□□□ -1.69
SCM3YDL139C GAS2Q06135 555 aa4.51□□□□□ -1.69
SCM3YDL139C HSP33Q08914 237 aaKnown RBP4.51□□□□□ -1.69
SCM3YDL139C FMP40Q08968 688 aaPredicted RBP4.51□□□□□ -1.69
SCM3YDL139C HSP32Q08992 237 aa4.51□□□□□ -1.69
SCM3YDL139C PRS5Q12265 496 aaKnown RBP4.51□□□□□ -1.69
SCM3YDL139C INP53Q12271 1107 aa4.51□□□□□ -1.69
SCM3YDL139C HMS1Q12398 434 aa4.51□□□□□ -1.69
SCM3YDL139C YOR343CQ12484 108 aa4.51□□□□□ -1.69
SCM3YDL139C DPM1P14020 267 aaKnown RBP4.5□□□□□ -1.69
SCM3YDL139C SCO1P23833 295 aa4.5□□□□□ -1.69
SCM3YDL139C BUD23P25627 275 aaPredicted RBP4.5□□□□□ -1.69
SCM3YDL139C RSM22P36056 628 aa4.5□□□□□ -1.69
SCM3YDL139C ANR2P36090 516 aaPredicted RBP4.5□□□□□ -1.69
SCM3YDL139C TCM62P38228 572 aaKnown RBP4.5□□□□□ -1.69
SCM3YDL139C FCY21P40039 528 aa4.5□□□□□ -1.69
SCM3YDL139C YIL166CP40445 542 aa4.5□□□□□ -1.69
SCM3YDL139C GDS1P41913 522 aa4.5□□□□□ -1.69
SCM3YDL139C FET5P43561 622 aa4.5□□□□□ -1.69
SCM3YDL139C YJR141WP47172 347 aaPredicted RBP4.5□□□□□ -1.69
SCM3YDL139C DOC1P53068 250 aa4.5□□□□□ -1.69
SCM3YDL139C VOA1P53262 265 aa4.5□□□□□ -1.69
SCM3YDL139C PXR1P53335 271 aaPredicted RBP4.5□□□□□ -1.69
SCM3YDL139C COX20Q04935 205 aa4.5□□□□□ -1.69
SCM3YDL139C BUR2Q05949 395 aa4.5□□□□□ -1.69
SCM3YDL139C PHO92Q06390 306 aa4.5□□□□□ -1.69
SCM3YDL139C BLM10P43583 2143 aa4.49□□□□□ -1.69
SCM3YDL139C REP1P03871 373 aa4.49□□□□□ -1.69
SCM3YDL139C HIS3P06633 220 aa4.49□□□□□ -1.69
SCM3YDL139C YML003WP0CF16 290 aa4.49□□□□□ -1.69
SCM3YDL139C STE18P18852 110 aa4.49□□□□□ -1.69
SCM3YDL139C PRE7P23724 241 aaKnown RBP4.49□□□□□ -1.69
SCM3YDL139C YCP4P25349 247 aaKnown RBP4.49□□□□□ -1.69
SCM3YDL139C PTC6P25646 442 aa4.49□□□□□ -1.69
SCM3YDL139C YJU2P28320 278 aaPredicted RBP4.49□□□□□ -1.69
SCM3YDL139C SNC1P31109 117 aa4.49□□□□□ -1.69
SCM3YDL139C FUN26P31381 517 aa4.49□□□□□ -1.69
SCM3YDL139C PPQ1P32945 549 aa4.49□□□□□ -1.69
SCM3YDL139C CLG1P35190 452 aa4.49□□□□□ -1.69
SCM3YDL139C VPS51P36116 164 aa4.49□□□□□ -1.69
SCM3YDL139C HTD2P38790 280 aaKnown RBP4.49□□□□□ -1.69
SCM3YDL139C PSD1P39006 500 aa4.49□□□□□ -1.69
SCM3YDL139C YIL060WP40519 144 aa4.49□□□□□ -1.69
SCM3YDL139C SER2P42941 309 aa4.49□□□□□ -1.69
SCM3YDL139C RPE1P46969 238 aa4.49□□□□□ -1.69
SCM3YDL139C PHB2P50085 310 aa4.49□□□□□ -1.69
SCM3YDL139C YGR066CP53242 292 aa4.49□□□□□ -1.69
SCM3YDL139C MPP6P53725 186 aaPredicted RBP4.49□□□□□ -1.69
SCM3YDL139C PET191Q02772 108 aa4.49□□□□□ -1.69
SCM3YDL139C URC2Q04411 772 aa4.49□□□□□ -1.69
SCM3YDL139C MFB1Q04922 465 aa4.49□□□□□ -1.69
SCM3YDL139C DIC1Q06143 298 aa4.49□□□□□ -1.69
SCM3YDL139C YLR456WQ06199 204 aa4.49□□□□□ -1.69
SCM3YDL139C TPO3Q06451 622 aa4.49□□□□□ -1.69
SCM3YDL139C SYO1Q07395 620 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms