RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C KIN28P06242 306 aa1.9□□□□□ -2.1
BRE1YDL074C BAR1P12630 587 aa1.9□□□□□ -2.1
BRE1YDL074C NCP1P16603 691 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C UTR1P21373 530 aa1.9□□□□□ -2.1
BRE1YDL074C GAS1P22146 559 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C IFM1P25038 676 aa1.9□□□□□ -2.1
BRE1YDL074C KRR1P25586 316 aaPredicted RBP1.9□□□□□ -2.1
BRE1YDL074C YCR102CP25608 368 aa1.9□□□□□ -2.1
BRE1YDL074C CNE1P27825 502 aa1.9□□□□□ -2.1
BRE1YDL074C PRE4P30657 266 aa1.9□□□□□ -2.1
BRE1YDL074C ACB1P31787 87 aa1.9□□□□□ -2.1
BRE1YDL074C RNP1P32385 249 aa1.9□□□□□ -2.1
BRE1YDL074C PTR2P32901 601 aa1.9□□□□□ -2.1
BRE1YDL074C SNC2P33328 115 aa1.9□□□□□ -2.1
BRE1YDL074C PAD1P33751 242 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
BRE1YDL074C YPC1P38298 316 aa1.9□□□□□ -2.1
BRE1YDL074C SDS24P38314 527 aa1.9□□□□□ -2.1
BRE1YDL074C MTC4P38335 694 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C ARO9P38840 513 aaPredicted RBP1.9□□□□□ -2.1
BRE1YDL074C FMP52P40008 231 aa1.9□□□□□ -2.1
BRE1YDL074C SLM1P40485 686 aa1.9□□□□□ -2.1
BRE1YDL074C HSV2P50079 448 aaPredicted RBP1.9□□□□□ -2.1
BRE1YDL074C UBC12P52491 188 aa1.9□□□□□ -2.1
BRE1YDL074C SEH1P53011 349 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C RMD9P53140 646 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C MTL1P53214 551 aa1.9□□□□□ -2.1
BRE1YDL074C POP6P53218 158 aa1.9□□□□□ -2.1
BRE1YDL074C VHT1P53241 593 aa1.9□□□□□ -2.1
BRE1YDL074C SOK2P53438 785 aaPredicted RBP1.9□□□□□ -2.1
BRE1YDL074C YVH1Q02256 364 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C KAP120Q02932 1032 aa1.9□□□□□ -2.1
BRE1YDL074C PEX25Q02969 394 aa1.9□□□□□ -2.1
BRE1YDL074C ISU1Q03020 165 aa1.9□□□□□ -2.1
BRE1YDL074C INP1Q03694 420 aa1.9□□□□□ -2.1
BRE1YDL074C EKI1Q03764 534 aa1.9□□□□□ -2.1
BRE1YDL074C TY1A-DR2Q03964 440 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C BNA7Q04066 261 aa1.9□□□□□ -2.1
BRE1YDL074C YLR224WQ05947 369 aa1.9□□□□□ -2.1
BRE1YDL074C YLR456WQ06199 204 aa1.9□□□□□ -2.1
BRE1YDL074C KEI1Q06346 221 aa1.9□□□□□ -2.1
BRE1YDL074C YOR385WQ08909 290 aa1.9□□□□□ -2.1
BRE1YDL074C NIP7Q08962 181 aaKnown RBP1.9□□□□□ -2.1
BRE1YDL074C NPC2Q12408 173 aa1.9□□□□□ -2.1
BRE1YDL074C ISN1Q99312 450 aa1.9□□□□□ -2.1
BRE1YDL074C TAD3Q9URQ3 322 aa1.9□□□□□ -2.1
BRE1YDL074C TDH2P00358 332 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C SOD2P00447 233 aa1.9□□□□□ -2.11
BRE1YDL074C SSA3P09435 649 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C YHR214C-DP0CX93 97 aa1.9□□□□□ -2.11
BRE1YDL074C URA6P15700 204 aa1.9□□□□□ -2.11
BRE1YDL074C PDX1P16451 410 aa1.9□□□□□ -2.11
BRE1YDL074C GRX2P17695 143 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C HXT2P23585 541 aa1.9□□□□□ -2.11
BRE1YDL074C CPR4P25334 318 aa1.9□□□□□ -2.11
BRE1YDL074C SUA5P32579 426 aa1.9□□□□□ -2.11
BRE1YDL074C VMA8P32610 256 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C PPG1P32838 368 aa1.9□□□□□ -2.11
BRE1YDL074C RPS27AP35997 82 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C FLO10P36170 1169 aa1.9□□□□□ -2.11
BRE1YDL074C SHG1P38337 142 aa1.9□□□□□ -2.11
BRE1YDL074C SSH1P38353 490 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C RPS27BP38711 82 aa1.9□□□□□ -2.11
BRE1YDL074C OCA5P38738 679 aa1.9□□□□□ -2.11
BRE1YDL074C WSC4P38739 605 aa1.9□□□□□ -2.11
BRE1YDL074C LTP1P40347 161 aa1.9□□□□□ -2.11
BRE1YDL074C BMT5P40493 336 aa1.9□□□□□ -2.11
BRE1YDL074C CAT5P41735 233 aa1.9□□□□□ -2.11
BRE1YDL074C GNA1P43577 159 aaPredicted RBP1.9□□□□□ -2.11
BRE1YDL074C YGR266WP53326 701 aa1.9□□□□□ -2.11
BRE1YDL074C PDR16P53860 351 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C ARG5,6Q01217 863 aa1.9□□□□□ -2.11
BRE1YDL074C HAS1Q03532 505 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C VBA1Q04301 562 aa1.9□□□□□ -2.11
BRE1YDL074C HLR1Q04429 423 aa1.9□□□□□ -2.11
BRE1YDL074C YMR252CQ04814 134 aa1.9□□□□□ -2.11
BRE1YDL074C RBS1Q05672 457 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C COA4Q05809 96 aa1.9□□□□□ -2.11
BRE1YDL074C NOC4Q06512 552 aaPredicted RBP1.9□□□□□ -2.11
BRE1YDL074C YPR147CQ06522 304 aaKnown RBP1.9□□□□□ -2.11
BRE1YDL074C YLR031WQ07978 186 aa1.9□□□□□ -2.11
BRE1YDL074C AEP3Q12089 606 aa1.9□□□□□ -2.11
BRE1YDL074C INP53Q12271 1107 aa1.9□□□□□ -2.11
BRE1YDL074C POL2P21951 2222 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C YLR358CO13565 187 aa1.89□□□□□ -2.11
BRE1YDL074C ADK1P07170 222 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C CTA1P15202 515 aa1.89□□□□□ -2.11
BRE1YDL074C ERG8P24521 451 aa1.89□□□□□ -2.11
BRE1YDL074C PUP1P25043 261 aa1.89□□□□□ -2.11
BRE1YDL074C ADH7P25377 361 aa1.89□□□□□ -2.11
BRE1YDL074C CAM1P29547 415 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C FAA1P30624 700 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C ERG24P32462 438 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C ACP1P32463 125 aa1.89□□□□□ -2.11
BRE1YDL074C SEF1P34228 1148 aa1.89□□□□□ -2.11
BRE1YDL074C MRPL36P36531 177 aa1.89□□□□□ -2.11
BRE1YDL074C RPP1P38786 293 aa1.89□□□□□ -2.11
BRE1YDL074C YHR122WP38829 231 aa1.89□□□□□ -2.11
BRE1YDL074C BOL3P39724 118 aa1.89□□□□□ -2.11
BRE1YDL074C PUG1P40100 303 aa1.89□□□□□ -2.11
BRE1YDL074C YNL195CP40168 261 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms