RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	SWI3	P32591	825 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	GDH2	P33327	1092 aa	Known RBP	0.57	□□□□□ -2.32
HMRA2	YCR096C	CSG2	P35206	410 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	YKL063C	P35725	167 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	HMT1	P38074	348 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	YHR045W	P38775	560 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	SSO2	P39926	295 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	YJL016W	P47072	561 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	MPP10	P47083	593 aa	Known RBP	0.57	□□□□□ -2.32
HMRA2	YCR096C	MDM34	P53083	459 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	CDC14	Q00684	551 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	SDC1	Q03323	175 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	EBS1	Q03466	884 aa	Known RBP	0.57	□□□□□ -2.32
HMRA2	YCR096C	YLR297W	Q05899	129 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	ASR1	Q06834	288 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	RTC5	Q12108	567 aa	Known RBP	0.57	□□□□□ -2.32
HMRA2	YCR096C	EMC6	Q12431	108 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	ISD11	Q6Q560	94 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	SPT7	P35177	1332 aa		0.57	□□□□□ -2.32
HMRA2	YCR096C	TDH1	P00360	332 aa	Known RBP	0.56	□□□□□ -2.32
HMRA2	YCR096C	RAS2	P01120	322 aa	Known RBP	0.56	□□□□□ -2.32
HMRA2	YCR096C	GPI12	P23797	304 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	RPL5	P26321	297 aa	Known RBP	0.56	□□□□□ -2.32
HMRA2	YCR096C	DOA4	P32571	926 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	SER33	P40510	469 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	MRPL49	P40858	161 aa	Predicted RBP	0.56	□□□□□ -2.32
HMRA2	YCR096C	CDC40	P40968	455 aa	Predicted RBP	0.56	□□□□□ -2.32
HMRA2	YCR096C	PEX31	P53203	462 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	CUR1	Q06469	252 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	PGC1	Q08959	321 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	GEP5	Q12393	293 aa		0.56	□□□□□ -2.32
HMRA2	YCR096C	YEL009C-A	A0A023PZF2	135 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	YMR316C-A	I2HB70	103 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	ATP6	P00854	259 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	RPS3	P05750	240 aa	Known RBP	0.55	□□□□□ -2.32
HMRA2	YCR096C	PPH21	P23594	369 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	DPB2	P24482	689 aa	Predicted RBP	0.55	□□□□□ -2.32
HMRA2	YCR096C	CAJ1	P39101	391 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	YIA6	P40556	373 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	YJL028W	P47062	111 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	COX16	P47081	118 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	IBA57	P47158	497 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	RSM10	Q03201	203 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	EMI1	Q04406	187 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	VAC14	Q06708	880 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	SIA1	Q12212	622 aa		0.55	□□□□□ -2.32
HMRA2	YCR096C	UBR2	Q07963	1872 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	RPP0	P05317	312 aa	Known RBP	0.54	□□□□□ -2.32
HMRA2	YCR096C	PET18	P25362	215 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	BMH1	P29311	267 aa	Known RBP	0.54	□□□□□ -2.32
HMRA2	YCR096C	SFC1	P33303	322 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	YHL026C	P38740	315 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	OSW5	P40219	148 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	AGP3	P43548	558 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	YJL118W	P47022	219 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	GTO1	P48239	356 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	NIF3	P53081	288 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	COG7	P53195	279 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	YPL077C	Q02831	240 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	TAF9	Q05027	157 aa		0.54	□□□□□ -2.32
HMRA2	YCR096C	CYR1	P08678	2026 aa	Known RBP	0.54	□□□□□ -2.32
HMRA2	YCR096C	TPM1	P17536	199 aa	Known RBP	0.53	□□□□□ -2.32
HMRA2	YCR096C	YHL049C	P38722	271 aa		0.53	□□□□□ -2.32
HMRA2	YCR096C	TIF34	P40217	347 aa	Known RBP	0.53	□□□□□ -2.32
HMRA2	YCR096C	SMD3	P43321	101 aa	Known RBP	0.53	□□□□□ -2.32
HMRA2	YCR096C	VOA1	P53262	265 aa		0.53	□□□□□ -2.32
HMRA2	YCR096C	ATC1	Q04005	294 aa		0.53	□□□□□ -2.32
HMRA2	YCR096C	PEX12	Q04370	399 aa		0.53	□□□□□ -2.32
HMRA2	YCR096C	RRG8	Q06109	277 aa		0.53	□□□□□ -2.32
HMRA2	YCR096C	TRX1	P22217	103 aa	Known RBP	0.52	□□□□□ -2.33
HMRA2	YCR096C	POF1	P25576	258 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	CSM1	P25651	190 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	CAM1	P29547	415 aa	Known RBP	0.52	□□□□□ -2.33
HMRA2	YCR096C	MAL32	P38158	584 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	NPT1	P39683	429 aa	Known RBP	0.52	□□□□□ -2.33
HMRA2	YCR096C	AYR1	P40471	297 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	AGX1	P43567	385 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	GCD14	P46959	383 aa	Predicted RBP	0.52	□□□□□ -2.33
HMRA2	YCR096C	SNX4	P47057	423 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	TAD2	P47058	250 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	KEL2	P50090	882 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	YGL185C	P53100	379 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	MAL12	P53341	584 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	VBA1	Q04301	562 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	BOP2	Q06150	570 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	ARV1	Q06541	321 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	AI5_BETA	Q9ZZX0	354 aa		0.52	□□□□□ -2.33
HMRA2	YCR096C	ILV1	P00927	576 aa	Known RBP	0.51	□□□□□ -2.33
HMRA2	YCR096C	SGA1	P08019	549 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	RNP1	P32385	249 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	RPC25	P35718	212 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	BLI1	P35727	113 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	ECM13	P38195	257 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.51	□□□□□ -2.33	not detected
HMRA2	YCR096C	HIS2	P38635	335 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	MNN9	P39107	395 aa	Known RBP	0.51	□□□□□ -2.33
HMRA2	YCR096C	YGL034C	P53186	121 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	CPD1	P53314	239 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	SWS2	P53937	143 aa		0.51	□□□□□ -2.33
HMRA2	YCR096C	SFH1	Q06168	426 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 1692.1 ms