RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B YPT32P51996 222 aaKnown RBP0.28□□□□□ -2.36
HTL1YCR020W-B FMP41P53889 259 aaKnown RBP0.28□□□□□ -2.36
HTL1YCR020W-B PRM15Q03262 622 aa0.28□□□□□ -2.36
HTL1YCR020W-B YMR209CQ03648 457 aa0.28□□□□□ -2.36
HTL1YCR020W-B YML018CQ03730 393 aa0.28□□□□□ -2.36
HTL1YCR020W-B YOR114WQ12219 294 aa0.28□□□□□ -2.36
HTL1YCR020W-B YMR316C-AI2HB70 103 aa0.27□□□□□ -2.37
HTL1YCR020W-B RNR2P09938 399 aaKnown RBP0.27□□□□□ -2.37
HTL1YCR020W-B RNP1P32385 249 aa0.27□□□□□ -2.37
HTL1YCR020W-B GDH2P33327 1092 aaKnown RBP0.27□□□□□ -2.37
HTL1YCR020W-B YHI9P38765 294 aa0.27□□□□□ -2.37
HTL1YCR020W-B MDM34P53083 459 aa0.27□□□□□ -2.37
HTL1YCR020W-B DAD3P69850 94 aa0.27□□□□□ -2.37
HTL1YCR020W-B TRM44Q02648 567 aaKnown RBP0.27□□□□□ -2.37
HTL1YCR020W-B DCN1Q12395 269 aa0.27□□□□□ -2.37
HTL1YCR020W-B FBA1P14540 359 aaKnown RBP0.26□□□□□ -2.37
HTL1YCR020W-B FPR1P20081 114 aaKnown RBP0.26□□□□□ -2.37
HTL1YCR020W-B SPT4P32914 102 aaPredicted RBP0.26□□□□□ -2.37
HTL1YCR020W-B MAL32P38158 584 aa0.26□□□□□ -2.37
HTL1YCR020W-B YBR219CP38317 127 aa0.26□□□□□ -2.37
HTL1YCR020W-B VTC1P40046 129 aaRIP-Chip data0.26□□□□□ -2.37not detected
HTL1YCR020W-B MAL12P53341 584 aa0.26□□□□□ -2.37
HTL1YCR020W-B AAH1P53909 347 aa0.26□□□□□ -2.37
HTL1YCR020W-B MZM1Q03429 123 aaPredicted RBP0.26□□□□□ -2.37
HTL1YCR020W-B YMR111CQ04461 462 aaPredicted RBP0.26□□□□□ -2.37
HTL1YCR020W-B PML1Q07930 204 aaPredicted RBP0.26□□□□□ -2.37
HTL1YCR020W-B PST1Q12355 444 aa0.26□□□□□ -2.37
HTL1YCR020W-B GAL3P13045 520 aa0.25□□□□□ -2.37
HTL1YCR020W-B YGL010WP25338 174 aa0.25□□□□□ -2.37
HTL1YCR020W-B SUA5P32579 426 aa0.25□□□□□ -2.37
HTL1YCR020W-B YKL063CP35725 167 aa0.25□□□□□ -2.37
HTL1YCR020W-B SWD2P36104 329 aaPredicted RBP0.25□□□□□ -2.37
HTL1YCR020W-B HMT1P38074 348 aa0.25□□□□□ -2.37
HTL1YCR020W-B FET3P38993 636 aa0.25□□□□□ -2.37
HTL1YCR020W-B BMT5P40493 336 aa0.25□□□□□ -2.37
HTL1YCR020W-B PRM10P42946 383 aa0.25□□□□□ -2.37
HTL1YCR020W-B RPL37AP49166 88 aaKnown RBP0.25□□□□□ -2.37
HTL1YCR020W-B APC9Q12107 265 aa0.25□□□□□ -2.37
HTL1YCR020W-B SMT3Q12306 101 aaKnown RBP0.25□□□□□ -2.37
HTL1YCR020W-B RAD3P06839 778 aa0.24□□□□□ -2.37
HTL1YCR020W-B CAM1P29547 415 aaKnown RBP0.24□□□□□ -2.37
HTL1YCR020W-B YBR220CP38318 560 aa0.24□□□□□ -2.37
HTL1YCR020W-B LIN1P38852 340 aaPredicted RBP0.24□□□□□ -2.37
HTL1YCR020W-B TEM1P38987 245 aa0.24□□□□□ -2.37
HTL1YCR020W-B YJL028WP47062 111 aa0.24□□□□□ -2.37
HTL1YCR020W-B VPS60Q03390 229 aa0.24□□□□□ -2.37
HTL1YCR020W-B CSI2Q08054 341 aa0.24□□□□□ -2.37
HTL1YCR020W-B FKS1P38631 1876 aaKnown RBP0.24□□□□□ -2.37
HTL1YCR020W-B PET494P07390 489 aaPredicted RBP0.23□□□□□ -2.37
HTL1YCR020W-B VMA2P16140 517 aaKnown RBP0.23□□□□□ -2.37
HTL1YCR020W-B SCL1P21243 252 aaKnown RBP0.23□□□□□ -2.37
HTL1YCR020W-B CCA1P21269 546 aa0.23□□□□□ -2.37
HTL1YCR020W-B MDH2P22133 377 aa0.23□□□□□ -2.37
HTL1YCR020W-B PEX4P29340 183 aa0.23□□□□□ -2.37
HTL1YCR020W-B DRE2P36152 348 aa0.23□□□□□ -2.37
HTL1YCR020W-B CYT2Q00873 224 aa0.23□□□□□ -2.37
HTL1YCR020W-B TAF9Q05027 157 aa0.23□□□□□ -2.37
HTL1YCR020W-B BOP2Q06150 570 aa0.23□□□□□ -2.37
HTL1YCR020W-B ASR1Q06834 288 aa0.23□□□□□ -2.37
HTL1YCR020W-B SLD7Q08457 257 aa0.23□□□□□ -2.37
HTL1YCR020W-B NFI1Q12216 726 aa0.23□□□□□ -2.37
HTL1YCR020W-B ATO3Q12359 275 aa0.23□□□□□ -2.37
HTL1YCR020W-B RPS3P05750 240 aaKnown RBP0.22□□□□□ -2.37
HTL1YCR020W-B POX1P13711 748 aa0.22□□□□□ -2.37
HTL1YCR020W-B PPH21P23594 369 aa0.22□□□□□ -2.37
HTL1YCR020W-B SIF2P38262 535 aa0.22□□□□□ -2.37
HTL1YCR020W-B YIA6P40556 373 aa0.22□□□□□ -2.37
HTL1YCR020W-B RPL2AP0CX45 254 aaKnown RBP0.21□□□□□ -2.38
HTL1YCR020W-B RPL2BP0CX46 254 aaKnown RBP0.21□□□□□ -2.38
HTL1YCR020W-B POT1P27796 417 aaKnown RBP RIP-Chip data0.21□□□□□ -2.38not detected
HTL1YCR020W-B SWI3P32591 825 aa0.21□□□□□ -2.38
HTL1YCR020W-B RPC37P36121 282 aa0.21□□□□□ -2.38
HTL1YCR020W-B MPP10P47083 593 aaKnown RBP0.21□□□□□ -2.38
HTL1YCR020W-B ERG25P53045 309 aa0.21□□□□□ -2.38
HTL1YCR020W-B MRPS8Q03799 155 aa0.21□□□□□ -2.38
HTL1YCR020W-B LOA1Q06508 300 aa0.21□□□□□ -2.38
HTL1YCR020W-B POM33Q12164 279 aa0.21□□□□□ -2.38
HTL1YCR020W-B PAA1Q12447 191 aaKnown RBP0.21□□□□□ -2.38
HTL1YCR020W-B YER188C-AP0C0V2 99 aa0.2□□□□□ -2.38
HTL1YCR020W-B YHR032W-AP0C5N6 59 aa0.2□□□□□ -2.38
HTL1YCR020W-B DSF1P0CX08 502 aa0.2□□□□□ -2.38
HTL1YCR020W-B YNR073CP0CX09 502 aa0.2□□□□□ -2.38
HTL1YCR020W-B SWC5P38326 303 aa0.2□□□□□ -2.38
HTL1YCR020W-B YHR022CP38763 256 aa0.2□□□□□ -2.38
HTL1YCR020W-B NPT1P39683 429 aaKnown RBP0.2□□□□□ -2.38
HTL1YCR020W-B AIM20P40451 204 aa0.2□□□□□ -2.38
HTL1YCR020W-B AGX1P43567 385 aa0.2□□□□□ -2.38
HTL1YCR020W-B OST2P46964 130 aa0.2□□□□□ -2.38
HTL1YCR020W-B RPL37BP51402 88 aaKnown RBP0.2□□□□□ -2.38
HTL1YCR020W-B YPL077CQ02831 240 aa0.2□□□□□ -2.38
HTL1YCR020W-B SDC1Q03323 175 aa0.2□□□□□ -2.38
HTL1YCR020W-B COS2P0CX12 379 aa0.19□□□□□ -2.38
HTL1YCR020W-B COS3P0CX13 379 aa0.19□□□□□ -2.38
HTL1YCR020W-B END3P39013 349 aa0.19□□□□□ -2.38
HTL1YCR020W-B COX16P47081 118 aa0.19□□□□□ -2.38
HTL1YCR020W-B KEL2P50090 882 aa0.19□□□□□ -2.38
HTL1YCR020W-B PDR16P53860 351 aaKnown RBP0.19□□□□□ -2.38
HTL1YCR020W-B RSM10Q03201 203 aa0.19□□□□□ -2.38
HTL1YCR020W-B CYR1P08678 2026 aaKnown RBP0.18□□□□□ -2.38
HTL1YCR020W-B TDA11P38854 504 aa0.18□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms