RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	COLGALT2	Q8IYK4	626 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	RNF168	Q8IYW5	571 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	SLC44A3	Q8N4M1	653 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	CMAS	Q8NFW8	434 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	KCNG4	Q8TDN1	519 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	GPR152	Q8TDT2	470 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	PRPF31	Q8WWY3	499 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	SMG7	Q92540	1137 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	RABGGTA	Q92696	567 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	CPB2	Q96IY4	423 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	CEP170P1	Q96L14	293 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZFP42	Q96MM3	310 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	GAD1	Q99259	594 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	TMEM175	Q9BSA9	504 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	APOL6	Q9BWW8	343 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	DHX33	Q9H6R0	707 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	TBC1D17	Q9HA65	648 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	BRMS1	Q9HCU9	246 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	MIOS	Q9NXC5	875 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	IGSF9	Q9P2J2	1179 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	DDX25	Q9UHL0	483 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	VAV3	Q9UKW4	847 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	KCNJ14	Q9UNX9	436 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	MTMR6	Q9Y217	621 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	IPP	Q9Y573	584 aa		11.15	□□□□□ -0.62
PHGDH-222	ENST00000641587	FANCM	Q8IYD8	2048 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	CNTNAP2	Q9UHC6	1331 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	MYH15	Q9Y2K3	1946 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	CARNS1	A5YM72	827 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	POTEM	A6NI47	508 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	ZBTB39	O15060	712 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	LRRN2	O75325	713 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	EFEMP2	O95967	443 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	ADH1A	P07327	375 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	RPL17	P18621	184 aa	Known RBP	11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	NCL	P19338	710 aa	Known RBP	11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	RFX1	P22670	979 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	GLUD2	P49448	558 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	LAMTOR4	Q0VGL1	99 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	KIAA0319	Q5VV43	1072 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	SRGAP1	Q7Z6B7	1085 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	FERMT3	Q86UX7	667 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	PALB2	Q86YC2	1186 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	KIAA2013	Q8IYS2	634 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	BLID	Q8IZY5	108 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	RNF149	Q8NC42	400 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	FBXO18	Q8NFZ0	1043 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	PSPC1	Q8WXF1	523 aa	Known RBP	11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	SLC7A3	Q8WY07	619 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	FOXQ1	Q9C009	403 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	SH3GLB2	Q9NR46	395 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	EPS15L1	Q9UBC2	864 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	WNT16	Q9UBV4	365 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	CACNA1I	Q9P0X4	2223 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	CACNA1A	O00555	2505 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	ZNF292	O60281	2723 aa		11.14	□□□□□ -0.63
PHGDH-222	ENST00000641587	ARL5C	A6NH57	179 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	TGM5	O43548	720 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	TSPAN1	O60635	241 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	F13A1	P00488	732 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	LMNA	P02545	664 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	SRF	P11831	508 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	ITGA4	P13612	1032 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	GLUL	P15104	373 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	KRT2	P35908	639 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	QARS	P47897	775 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	DSG1	Q02413	1049 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	DSC1	Q08554	894 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	PPP2R5C	Q13362	524 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	EMC2	Q15006	297 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	CDR2L	Q86X02	465 aa	Predicted RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	DCLK2	Q8N568	766 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	STAM	Q92783	540 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	JPH2	Q9BR39	696 aa	Predicted RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	LXN	Q9BS40	222 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	RPP25	Q9BUL9	199 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	GPR62	Q9BZJ7	368 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	NXF3	Q9H4D5	531 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	RXFP1	Q9HBX9	757 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	KCNMB3	Q9NPA1	279 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	XPNPEP1	Q9NQW7	623 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	RGL1	Q9NZL6	768 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	DLGAP2	Q9P1A6	1054 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	KANSL3	Q9P2N6	904 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	NUMBL	Q9Y6R0	609 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	MIA3	Q5JRA6	1907 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	OTOGL	Q3ZCN5	2332 aa		11.13	□□□□□ -0.63
PHGDH-222	ENST00000641587	ERLIN2	O94905	339 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	NTHL1	P78549	312 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	CYP4A11	Q02928	519 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	HTR4	Q13639	388 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	CTTN	Q14247	550 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	NONO	Q15233	471 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	FUT10	Q6P4F1	479 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	MOXD1	Q6UVY6	613 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	DIS3L2	Q8IYB7	885 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	DAGLB	Q8NCG7	672 aa		11.12	□□□□□ -0.63
PHGDH-222	ENST00000641587	DYDC2	Q96IM9	177 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms