RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
PAX6-258ENST00000639548 SMARCAD1Q9H4L7 1026 aa13.17□□□□□ -0.3
PAX6-258ENST00000639548 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
PAX6-258ENST00000639548 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
PAX6-258ENST00000639548 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 ZNF233A6NK53 670 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 LRRIQ3A6PVS8 624 aaPredicted RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 GPR25O00155 361 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 NOP56O00567 594 aaKnown RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 CES2O00748 559 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 ADCY3O60266 1144 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 MOCS3O95396 460 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 LIG4P49917 911 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 SOX10P56693 466 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 PSMD6Q15008 389 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 C15orf39Q6ZRI6 1047 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 DEPTORQ8TB45 409 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAX6-258ENST00000639548 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 ZCCHC17Q9NP64 241 aaKnown RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAX6-258ENST00000639548 RAB21Q9UL25 225 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 V9GYY5 206 aaPredicted RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
PAX6-258ENST00000639548 NCANO14594 1321 aa13.16□□□□□ -0.3
PAX6-258ENST00000639548 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 K7ERI5 159 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.3
PAX6-258ENST00000639548 ASAP2O43150 1006 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 HBP1O60381 514 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 H2AFZP0C0S5 128 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 KLRC1P26715 233 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 GCLMP48507 274 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 MFAP3P55082 362 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 ARID5AQ03989 594 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 CCL15Q16663 113 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 H2AFVQ71UI9 128 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
PAX6-258ENST00000639548 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
PAX6-258ENST00000639548 SHC3Q92529 594 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 RUBCNQ92622 972 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 BICD1Q96G01 975 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 PARK7Q99497 189 aaKnown RBP13.15□□□□□ -0.3
PAX6-258ENST00000639548 C2orf40Q9H1Z8 148 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
PAX6-258ENST00000639548 HTTP42858 3142 aa13.15□□□□□ -0.31
PAX6-258ENST00000639548 A0A0B4J269 797 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 ZBTB42B2RXF5 422 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 ENC1O14682 589 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 TXNP10599 105 aaKnown RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 CYP2C8P10632 490 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 AP3M2P53677 418 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 GCNT1Q02742 428 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 CAPSQ13938 189 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 BRD3Q15059 726 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 FAM71AQ8IYT1 594 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 LMBR1Q8WVP7 490 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 SAAL1Q96ER3 474 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 CCDC113Q9H0I3 377 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 EFCC1Q9HA90 598 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 UBE2TQ9NPD8 197 aaPredicted RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 AGO2Q9UKV8 859 aaKnown RBP13.14□□□□□ -0.31
PAX6-258ENST00000639548 COL1A2P08123 1366 aa13.14□□□□□ -0.31
PAX6-258ENST00000639548 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
PAX6-258ENST00000639548 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
PAX6-258ENST00000639548 LRRIQ4A6NIV6 560 aa13.13□□□□□ -0.31
PAX6-258ENST00000639548 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
PAX6-258ENST00000639548 FKTNO75072 461 aa13.13□□□□□ -0.31
PAX6-258ENST00000639548 GH1P01241 217 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms