RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PDGFRAP16234 1089 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 GJA1P17302 382 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 IL1RL1Q01638 556 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SMARCB1Q12824 385 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TLR1Q15399 786 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 EAPPQ56P03 285 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TRAPPC3LQ5T215 181 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CNNM4Q6P4Q7 775 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FOXR1Q6PIV2 292 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 DNAJB7Q7Z6W7 309 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TBC1D19Q8N5T2 526 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ABTB2Q8N961 1025 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ATAD1Q8NBU5 361 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ACAT2Q9BWD1 397 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CDH19Q9H159 772 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PPARGC1AQ9UBK2 798 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 NPATQ14207 1427 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 INSRP06213 1382 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PLEKHH2Q8IVE3 1493 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 C16orf96A6NNT2 1141 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 E7ENQ6 273 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CRABP2P29373 138 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 RTKN2Q8IZC4 609 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CACNA2D3Q8IZS8 1091 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CNTROBQ8N137 903 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FAM163AQ96GL9 167 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PACSIN1Q9BY11 444 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SP140LQ9H930 580 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 IARS2Q9NSE4 1012 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CNTN3Q9P232 1028 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FBXO40Q9UH90 709 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TELO2Q9Y4R8 837 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CFAP73A6NFT4 308 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ZSCAN5BA6NJL1 495 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TMEM88BA6NKF7 163 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 BTN3A1O00481 513 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FBP2O00757 339 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PER2O15055 1255 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 USP1O94782 785 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 P4HA1P13674 534 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SLC9A1P19634 815 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 RGS7P49802 495 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FOXK1P85037 733 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 RIPK1Q13546 671 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 DOC2AQ14183 400 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 FRG1Q14331 258 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 COMTD1Q86VU5 262 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TRMT2BQ96GJ1 504 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SMAD5Q99717 465 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TMEM245Q9H330 911 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 DENND2DQ9H6A0 471 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 AP3D1O14617 1153 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 MAN1A2O60476 641 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ANP32DO95626 131 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 RXRAP19793 462 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NUP62P37198 522 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PCP4P48539 62 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CCR3P51677 355 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NUBP1P53384 320 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 DSC3Q14574 896 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TTMPQ5BVD1 217 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ARHGAP36Q6ZRI8 547 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HS2ST1Q7LGA3 356 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NOSTRINQ8IVI9 506 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 IFT20Q8IY31 132 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HNRNPLLQ8WVV9 542 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PIGSQ96S52 555 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TCF25Q9BQ70 676 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 VIPAS39Q9H9C1 493 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 LZTFL1Q9NQ48 299 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EIF2B4Q9UI10 523 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HDAC3O15379 428 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 HOXC11O43248 304 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 STX10O60499 249 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NIPSNAP2O75323 286 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 JAK1P23458 1154 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EIF2B2P49770 351 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NCF4Q15080 339 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EPHA7Q15375 998 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 DACT2Q5SW24 774 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 INTS11Q5TA45 600 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 FYB2Q5VWT5 728 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ZNF425Q6IV72 752 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TEX47Q8TBZ9 253 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 EPS8L1Q8TE68 723 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TUBGCP3Q96CW5 907 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 SLC26A6Q9BXS9 759 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 NOD2Q9HC29 1040 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 DMTF1Q9Y222 760 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 PCDHB12Q9Y5F1 795 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CNTLNQ9NXG0 1405 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CCNA1P78396 465 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CUL2Q13617 745 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 VEPH1Q14D04 833 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ERICH1Q86X53 443 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 FUKQ8N0W3 1084 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 CFAP61Q8NHU2 1237 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 TESK2Q96S53 571 aa4.56□□□□□ -1.68
SCN3A-209ENST00000639244 ABCG8Q9H221 673 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms