RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FAM196BA6NMK8 535 aa19.58■□□□□ 0.73
SCARB2-213ENST00000638680 AARSP49588 968 aaKnown RBP eCLIP19.58■□□□□ 0.73
SCARB2-213ENST00000638680 CDKL3Q8IVW4 592 aaPredicted RBP19.58■□□□□ 0.73
SCARB2-213ENST00000638680 ZIM3Q96PE6 472 aa19.58■□□□□ 0.73
SCARB2-213ENST00000638680 FAM49AQ9H0Q0 323 aaPredicted RBP19.58■□□□□ 0.73
SCARB2-213ENST00000638680 TMEM94Q12767 1356 aa19.58■□□□□ 0.73
SCARB2-213ENST00000638680 SCARF1Q14162 830 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 ARHGAP27Q6ZUM4 889 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 SLC13A4Q9UKG4 626 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 PALLDQ8WX93 1383 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 BNIP3LO60238 219 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 CRKP46108 304 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 QARSP47897 775 aaKnown RBP19.58■□□□□ 0.72
SCARB2-213ENST00000638680 RABGAP1LQ5R372 815 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 SENP1Q9P0U3 644 aa19.58■□□□□ 0.72
SCARB2-213ENST00000638680 RAD51CO43502 376 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 AGBL2Q5U5Z8 902 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 CATSPER4Q7RTX7 472 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 ZNF711Q9Y462 761 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PSMD14O00487 310 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 TNFAIP2Q03169 654 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 CYTH1Q15438 398 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 QRICH1Q2TAL8 776 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 P3H1Q32P28 736 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 TRIM72Q6ZMU5 477 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 TUBE1Q9UJT0 475 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 SCP2P22307 547 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PCYT1AP49585 367 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 FOXO4P98177 505 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 IFT43Q96FT9 208 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 ATXN7L3BQ96GX2 97 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PHF20Q9BVI0 1012 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PSD3Q9NYI0 1048 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 BCORL1Q5H9F3 1711 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 ARHGEF37A1IGU5 675 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 ENOSF1Q7L5Y1 443 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 GPD1LQ8N335 351 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 SNX19Q92543 992 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PPP1R36Q96LQ0 422 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 LRFN2Q9ULH4 789 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 SMG5Q9UPR3 1016 aaKnown RBP19.57■□□□□ 0.72
SCARB2-213ENST00000638680 CFAP74Q9C0B2 1584 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 MROH7-TTC4A0A0A0MT08 1334 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PDXKO00764 312 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 PPP1R12AO14974 1030 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-213ENST00000638680 CYP27B1O15528 508 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 HNRNPCL1O60812 293 aaKnown RBP19.57■□□□□ 0.72
SCARB2-213ENST00000638680 KRT76Q01546 638 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 KCNA1Q09470 495 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 SUPT20HL1Q3ZLR7 823 aa19.57■□□□□ 0.72
SCARB2-213ENST00000638680 SYDE1Q6ZW31 735 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-213ENST00000638680 POLR3FQ9H1D9 316 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-213ENST00000638680 NMT1P30419 496 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 ELF1P32519 619 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 GALCP54803 685 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 FLOT2Q14254 428 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 SYCP2LQ5T4T6 812 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 FAM102AQ5T9C2 384 aaPredicted RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 RNF135Q8IUD6 432 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 AGGF1Q8N302 714 aaeCLIP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 NOA1Q8NC60 698 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 CXorf56Q9H5V9 222 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 EHD2Q9NZN4 543 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 KIF17Q9P2E2 1029 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 HNRNPCL2B2RXH8 293 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 IRAK1P51617 712 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 IMPG1Q17R60 797 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 LRRC36Q1X8D7 754 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 TSSK1BQ9BXA7 367 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 FEM1BQ9UK73 627 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 SSU72P8A0A1W2PR75 194 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 SLC1A1P43005 524 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 CDH6P55285 790 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 TRPM8Q7Z2W7 1104 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 ZNF609O15014 1411 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 SEC24DO94855 1032 aaPredicted RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 HNRNPCP07910 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 FASTKD1Q53R41 847 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 DHX35Q9H5Z1 703 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 GABBR1Q9UBS5 961 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 PIK3R2O00459 728 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 SLC16A3O15427 465 aaKnown RBP19.56■□□□□ 0.72
SCARB2-213ENST00000638680 ATXN8OSP0DMR3 200 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 HDAC4P56524 1084 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 DAB2P98082 770 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 C4orf33Q8N1A6 199 aa19.56■□□□□ 0.72
SCARB2-213ENST00000638680 ZNF335Q9H4Z2 1342 aaPredicted RBP19.55■□□□□ 0.72
SCARB2-213ENST00000638680 GYPCP04921 128 aa19.55■□□□□ 0.72
SCARB2-213ENST00000638680 SEC24CP53992 1094 aa19.55■□□□□ 0.72
SCARB2-213ENST00000638680 EIF3EP60228 445 aaKnown RBP19.55■□□□□ 0.72
SCARB2-213ENST00000638680 RC3H1Q5TC82 1133 aaKnown RBP19.55■□□□□ 0.72
SCARB2-213ENST00000638680 SWSAP1Q6NVH7 229 aa19.55■□□□□ 0.72
SCARB2-213ENST00000638680 ENO4A6NNW6 628 aa19.55■□□□□ 0.72
SCARB2-213ENST00000638680 KLK7P49862 253 aa19.55■□□□□ 0.72
SCARB2-213ENST00000638680 FAM182BQ5T319 152 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms