RNA–Protein interactions for RNA: ENST00000636916.1

SMARCA2-255, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-255	ENST00000636916	TARS	P26639	723 aa	Known RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	SCNN1G	P51170	649 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ARHGAP8	P85298	464 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	UBXN2B	Q14CS0	331 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	MIER3	Q7Z3K6	550 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	GPR161	Q8N6U8	529 aa	Known RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RDM1	Q8NG50	284 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ITFG1	Q8TB96	612 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PRPF31	Q8WWY3	499 aa	Known RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RABGGTA	Q92696	567 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	FGF13	Q92913	245 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ESYT1	Q9BSJ8	1104 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RTKN	Q9BST9	563 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	TEKT3	Q9BXF9	490 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	BCO2	Q9BYV7	579 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	CACNG4	Q9UBN1	327 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RALY	Q9UKM9	306 aa	Known RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	COL4A3BP	Q9Y5P4	624 aa		13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.79	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ARID2	Q68CP9	1835 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RALGAPA1	Q6GYQ0	2036 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ATRX	P46100	2492 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	EML1	O00423	815 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	MLH1	P40692	756 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	USP11	P51784	963 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	LMNB2	Q03252	620 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PRKCQ	Q04759	706 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916		Q4G0T1	1027 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	RTP2	Q5QGT7	225 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	FUT10	Q6P4F1	479 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	DHX32	Q7L7V1	743 aa	Known RBP	13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	SRGAP1	Q7Z6B7	1085 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	GPR65	Q8IYL9	337 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ETNPPL	Q8TBG4	499 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	ATRIP	Q8WXE1	791 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	TMEM143	Q96AN5	459 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	CLSTN3	Q9BQT9	956 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PAAF1	Q9BRP4	392 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PLA2G2F	Q9BZM2	168 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	DHX33	Q9H6R0	707 aa	Known RBP	13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	PRMT8	Q9NR22	394 aa	Predicted RBP	13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	FBXW11	Q9UKB1	542 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	CDV3	Q9UKY7	258 aa	Known RBP	13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	COL4A2	P08572	1712 aa		13.78	□□□□□ -0.2
SMARCA2-255	ENST00000636916	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ADAM12	O43184	909 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	PRPF3	O43395	683 aa	Known RBP	13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TDP2	O95551	362 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	SRGAP2C	P0DJJ0	459 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ITGA4	P13612	1032 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	CYP3A7	P24462	503 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	RCAN1	P53805	252 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	LAMTOR4	Q0VGL1	99 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	NTRK3	Q16288	839 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	USP41	Q3LFD5	358 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	WDFY3	Q8IZQ1	3526 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	PHKB	Q93100	1093 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	KXD1	Q9BQD3	176 aa		13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.77	□□□□□ -0.21
SMARCA2-255	ENST00000636916	NRG2	O14511	850 aa	Predicted RBP	13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TSPAN1	O60635	241 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	CPA1	P15085	419 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	GNA11	P29992	359 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	RPS9	P46781	194 aa	Known RBP	13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	AMHR2	Q16671	573 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TSGA10IP	Q3SY00	556 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ZBTB41	Q5SVQ8	909 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ELMSAN1	Q6PJG2	1045 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TBCK	Q8TEA7	893 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	CPB2	Q96IY4	423 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	UBN1	Q9NPG3	1134 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	HCFC1R1	Q9NWW0	138 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ADAM28	Q9UKQ2	775 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	USP18	Q9UMW8	372 aa		13.76	□□□□□ -0.21
SMARCA2-255	ENST00000636916	NID2	Q14112	1375 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916		M0R2N6	131 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TBC1D4	O60343	1298 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	PSMC5	P62195	406 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	SPEM2	Q0P670	501 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	MTAP	Q13126	283 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	TPRG1	Q6ZUI0	275 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	CNNM3	Q8NE01	707 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	LNX1	Q8TBB1	728 aa	Predicted RBP	13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	COLEC11	Q9BWP8	271 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	NXF3	Q9H4D5	531 aa	Known RBP	13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ANO2	Q9NQ90	1003 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	VPS54	Q9P1Q0	977 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	FAM208B	Q5VWN6	2430 aa		13.75	□□□□□ -0.21
SMARCA2-255	ENST00000636916	SLC30A4	O14863	429 aa		13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	ZBTB39	O15060	712 aa		13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	CCL16	O15467	120 aa		13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	AKAP5	P24588	427 aa		13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	IGFBP6	P24592	240 aa	Predicted RBP	13.74	□□□□□ -0.21
SMARCA2-255	ENST00000636916	MAGEA9	P43362	315 aa		13.74	□□□□□ -0.21

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