RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 CHRNA3P32297 505 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 ECE1P42892 770 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 RBBP5Q15291 538 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 RPS6KA2Q15349 733 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 MMEL1Q495T6 779 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 FAM182AQ5T1J6 154 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 ARMC9Q7Z3E5 817 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 RYBPQ8N488 228 aaPredicted RBP8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 TMEM143Q96AN5 459 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 MIS12Q9H081 205 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 VPS11Q9H270 941 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 HESX1Q9UBX0 185 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
CACNA1D-209ENST00000636448 MIF4GDA9UHW6 222 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 UBOX5O94941 541 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ENO1P06733 434 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 GSTA1P08263 222 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 GSTA2P09210 222 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ITGA8P53708 1063 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 RCAN1P53805 252 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CDR2Q01850 454 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 SPP2Q13103 211 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 C1orf146Q5VVC0 180 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CLEC4GQ6UXB4 293 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 KDELC2Q7Z4H8 507 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ZBTB8OSQ8IWT0 167 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 SCFD1Q8WVM8 642 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 PRCCQ92733 491 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 STAMBPL1Q96FJ0 436 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 SGSM3Q96HU1 749 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 MTRQ99707 1265 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 TRIM55Q9BYV6 548 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ISCUQ9H1K1 167 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 TRABDQ9H4I3 376 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 MRPL47Q9HD33 250 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 HAO1Q9UJM8 370 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 SHPRHQ149N8 1683 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 DLC1Q96QB1 1528 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 COPEO14579 308 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 HAUS5O94927 633 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ZBED1O96006 694 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 HSPA6P17066 643 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 IL1RL1Q01638 556 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CENPPQ6IPU0 288 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 RGS9BPQ6ZS82 235 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CEP128Q6ZU80 1094 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 PRUNE1Q86TP1 453 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 GBP7Q8N8V2 638 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ZSWIM2Q8NEG5 633 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CEP70Q8NHQ1 597 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ZNF507Q8TCN5 953 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 PWWP2AQ96N64 755 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 CBWD1Q9BRT8 395 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 HSD3B7Q9H2F3 369 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 TOPORSQ9NS56 1045 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 AKT3Q9Y243 479 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 USP15Q9Y4E8 981 aaPredicted RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 VWDEQ8N2E2 1590 aa8.65□□□□□ -1.02
CACNA1D-209ENST00000636448 GJB6O95452 261 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 SGPL1O95470 568 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 SKIP12755 728 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 CHRNA5P30532 468 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 GNA15P30679 374 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 SCTRP47872 440 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 CASP5P51878 434 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 SLC8A3P57103 927 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 BPIFB4P59827 614 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 HABP4Q5JVS0 413 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 BBOF1Q8ND07 529 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 MORC4Q8TE76 937 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 MED15Q96RN5 788 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 CHMP2BQ9UQN3 213 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 PRRC2BQ5JSZ5 2229 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 MAP1BP46821 2468 aaKnown RBP8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 NRXN1Q9ULB1 1477 aa8.65□□□□□ -1.03
CACNA1D-209ENST00000636448 MAP3K7O43318 606 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 STK10O94804 968 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 UBTFL6P0CB48 400 aaPredicted RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 RALAP11233 206 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 CNGA1P29973 690 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 ARFIP2P53365 341 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 ALDH18A1P54886 795 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 NLRP11P59045 1033 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 MRPS9P82933 396 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 ASPHQ12797 758 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 TMED1Q13445 227 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 PDIA5Q14554 519 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 CEP55Q53EZ4 464 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 RABGAP1LQ5R372 815 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms