RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZMYM2Q9UBW7 1377 aa19.81■□□□□ 0.76
PNKP-225ENST00000636214 H3BQV1 296 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 C2CD2LO14523 706 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 EPCAMP16422 314 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 AKAP5P24588 427 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 GRIK3Q13003 919 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 PDIA5Q14554 519 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 ATAT1Q5SQI0 421 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 APBB1IPQ7Z5R6 666 aaPredicted RBP19.8■□□□□ 0.76
PNKP-225ENST00000636214 KIFAP3Q92845 792 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 ZFP42Q96MM3 310 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 HERC2P3Q9BVR0 1158 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 BHMT2Q9H2M3 363 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 DDX19AQ9NUU7 478 aaKnown RBP19.8■□□□□ 0.76
PNKP-225ENST00000636214 DPP7Q9UHL4 492 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 KIAA1024Q9UPX6 916 aa19.8■□□□□ 0.76
PNKP-225ENST00000636214 TRIOO75962 3097 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 TECTAO75443 2155 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 ADH1AP07327 375 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 GLUD2P49448 558 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 FAM187BQ17R55 369 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 DTHD1Q6ZMT9 781 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 VN1R3Q9BXE9 311 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 SFXN1Q9H9B4 322 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 DNM3Q9UQ16 869 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 PCDHB6Q9Y5E3 794 aa19.79■□□□□ 0.76
PNKP-225ENST00000636214 MCM2P49736 904 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 EFNA5P52803 228 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 ZXDAP98168 799 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 DSC1Q08554 894 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 RILPL1Q5EBL4 403 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 C12orf76Q8N812 135 aaPredicted RBP19.78■□□□□ 0.76
PNKP-225ENST00000636214 FBXL18Q96ME1 805 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 KLHL5Q96PQ7 755 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 FZD8Q9H461 694 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 POMKQ9H5K3 350 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 KLK14Q9P0G3 267 aa19.78■□□□□ 0.76
PNKP-225ENST00000636214 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
PNKP-225ENST00000636214 ACKR2O00590 384 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 CNPP09543 421 aaKnown RBP19.77■□□□□ 0.76
PNKP-225ENST00000636214 PRPHP41219 470 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 DCAF4L1Q3SXM0 396 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 TRIM67Q6ZTA4 783 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 HFE2Q6ZVN8 426 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 C4orf32Q8N8J7 132 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 TDRD5Q8NAT2 981 aaKnown RBP19.77■□□□□ 0.76
PNKP-225ENST00000636214 SLC22A17Q8WUG5 538 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 BSNDQ8WZ55 320 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 TMX3Q96JJ7 454 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 PDZD7Q9H5P4 517 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 MARCH5Q9NX47 278 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 MIOSQ9NXC5 875 aa19.77■□□□□ 0.76
PNKP-225ENST00000636214 ZDBF2Q9HCK1 2354 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 TMEM221A6NGB7 291 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 M0R296 226 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 WEE2P0C1S8 567 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 GJB2P29033 226 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 CLCN4P51793 760 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 DMP1Q13316 513 aaPredicted RBP19.76■□□□□ 0.75
PNKP-225ENST00000636214 ZRSR1Q15695 479 aaKnown RBP19.76■□□□□ 0.75
PNKP-225ENST00000636214 PTPN21Q16825 1174 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 SUGP1Q8IWZ8 645 aaKnown RBP19.76■□□□□ 0.75
PNKP-225ENST00000636214 IGSF22Q8N9C0 903 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 PBXIP1Q96AQ6 731 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 ADAM28Q9UKQ2 775 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 SMC3Q9UQE7 1217 aa19.76■□□□□ 0.75
PNKP-225ENST00000636214 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 TADA2AO75478 443 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 GLUD1P00367 558 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 TOB1P50616 345 aaPredicted RBP19.75■□□□□ 0.75
PNKP-225ENST00000636214 CREMQ03060 361 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 SIGLEC14Q08ET2 396 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 TUSC3Q13454 348 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 ECM1Q16610 540 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 USP41Q3LFD5 358 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 FUT10Q6P4F1 479 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 CCDC149Q6ZUS6 474 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 CDK5RAP3Q96JB5 506 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 KIFC3Q9BVG8 833 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.75■□□□□ 0.75
PNKP-225ENST00000636214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.75■□□□□ 0.75
PNKP-225ENST00000636214 SNTG2Q9NY99 539 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 CDH22Q9UJ99 828 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.75■□□□□ 0.75
PNKP-225ENST00000636214 SF3B1O75533 1304 aaKnown RBP eCLIP19.75■□□□□ 0.75
PNKP-225ENST00000636214 PHLPP2Q6ZVD8 1323 aa19.75■□□□□ 0.75
PNKP-225ENST00000636214 MYO10Q9HD67 2058 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 C2CD4DB7Z1M9 353 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 K7ERI5 159 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 THP07101 528 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 DSG1Q02413 1049 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 PLCD3Q8N3E9 789 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 ACSF2Q96CM8 615 aaPredicted RBP19.74■□□□□ 0.75
PNKP-225ENST00000636214 DRC1Q96MC2 740 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 KCNH6Q9H252 994 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 MAN1C1Q9NR34 630 aa19.74■□□□□ 0.75
PNKP-225ENST00000636214 E9PMD0 336 aa19.73■□□□□ 0.75
PNKP-225ENST00000636214 RECQL4O94761 1208 aa19.73■□□□□ 0.75
PNKP-225ENST00000636214 MTMR3Q13615 1198 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms