RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 NT5DC1Q5TFE4 455 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 IGSF21Q96ID5 467 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 ZFP42Q96MM3 310 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 NTPCRQ9BSD7 190 aaKnown RBP17.26■□□□□ 0.35
LINC00339-207ENST00000634712 TCHPQ9BT92 498 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 COL25A1Q9BXS0 654 aaPredicted RBP17.26■□□□□ 0.35
LINC00339-207ENST00000634712 ZHX3Q9H4I2 956 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 SNTG2Q9NY99 539 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 DNAJB4Q9UDY4 337 aa17.26■□□□□ 0.35
LINC00339-207ENST00000634712 PLXNA4Q9HCM2 1894 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
LINC00339-207ENST00000634712 DDHD2O94830 711 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 OR1G1P47890 313 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 SLC11A1P49279 550 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 KCNQ1P51787 676 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 BECN1Q14457 450 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 MYCT1Q8N699 235 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 STK17AQ9UEE5 414 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 STK39Q9UEW8 545 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 TNFSF13BQ9Y275 285 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
LINC00339-207ENST00000634712 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 FSCN2O14926 492 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 INPPL1O15357 1258 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 PPP6R2O75170 966 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 YEATS4O95619 227 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 EDN1P05305 212 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.35
LINC00339-207ENST00000634712 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
LINC00339-207ENST00000634712 LEXMQ3ZCV2 418 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 SV2BQ7L1I2 683 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
LINC00339-207ENST00000634712 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 CDCA3Q99618 268 aaPredicted RBP17.24■□□□□ 0.35
LINC00339-207ENST00000634712 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
LINC00339-207ENST00000634712 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 CFAP45Q9UL16 551 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
LINC00339-207ENST00000634712 MYH11P35749 1972 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
LINC00339-207ENST00000634712 NRP1O14786 923 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 PER2O15055 1255 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 CXCL14O95715 111 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 BMP1P13497 986 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 STAT6P42226 847 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 NDUFV1P49821 464 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 ADAM15Q13444 863 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 GIT2Q14161 759 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 PUS10Q3MIT2 529 aaKnown RBP17.23■□□□□ 0.35
LINC00339-207ENST00000634712 ATL3Q6DD88 541 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 EFHBQ8N7U6 833 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 TMEM161BQ8NDZ6 487 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 TARS2Q9BW92 718 aaKnown RBP17.23■□□□□ 0.35
LINC00339-207ENST00000634712 COLEC11Q9BWP8 271 aa17.23■□□□□ 0.35
LINC00339-207ENST00000634712 PRG3Q9Y2Y8 225 aaPredicted RBP17.23■□□□□ 0.35
LINC00339-207ENST00000634712 ZMYM2Q9UBW7 1377 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 RECQL4O94761 1208 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 SCP2P22307 547 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00339-207ENST00000634712 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
LINC00339-207ENST00000634712 GRIK3Q13003 919 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 ZNF568Q3ZCX4 644 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 HAUS6Q7Z4H7 955 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 ZBTB33Q86T24 672 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 TMEM173Q86WV6 379 aaPredicted RBP17.22■□□□□ 0.35
LINC00339-207ENST00000634712 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 ADAMTS19Q8TE59 1207 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 BICD1Q96G01 975 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
LINC00339-207ENST00000634712 FAM50BQ9Y247 325 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 BRWD1Q9NSI6 2320 aa17.22■□□□□ 0.35
LINC00339-207ENST00000634712 SPTBN5Q9NRC6 3674 aaKnown RBP17.21■□□□□ 0.35
LINC00339-207ENST00000634712 K7ENM7 598 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 LINC01565O15544 149 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 TRAK2O60296 914 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 B4GALT3O60512 393 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 CUTAO60888 179 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 THP07101 528 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 SRGAP2BP0DMP2 458 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 MAPTP10636 758 aaKnown RBP17.21■□□□□ 0.35
LINC00339-207ENST00000634712 ABCD1P33897 745 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 PKP1Q13835 747 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms