RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	SLC5A4	Q9NY91	659 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TCEAL9	Q9UHQ7	104 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FAN1	Q9Y2M0	1017 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRAF6	Q9Y4K3	522 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	NPFFR2	Q9Y5X5	522 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FPGT-TNNI3K	V9GXZ4	949 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SIPA1L1	O43166	1804 aa		7.75	□□□□□ -1.17
SMARCA2-223	ENST00000634435	VCAN	P13611	3396 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SEPT4	O43236	478 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CRTAM	O95727	393 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	THBD	P07204	575 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CD3E	P07766	207 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CTSK	P43235	329 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	RARS	P54136	660 aa	Known RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	EPHB1	P54762	984 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SEPT7	Q16181	437 aa	Known RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CLEC16A	Q2KHT3	1053 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FAM47A	Q5JRC9	791 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	E4F1	Q66K89	784 aa	Predicted RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TATDN1	Q6P1N9	297 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	OGFOD3	Q6PK18	319 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CRTC3	Q6UUV7	619 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SLC39A5	Q6ZMH5	540 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	KIF18B	Q86Y91	864 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FMNL3	Q8IVF7	1028 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ARHGAP45	Q92619	1136 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FERMT2	Q96AC1	680 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FAM83C	Q9BQN1	747 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MCMBP	Q9BTE3	642 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MOV10L1	Q9BXT6	1211 aa	Known RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TTYH1	Q9H313	450 aa	Predicted RBP	7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GPR27	Q9NS67	375 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CAPN6	Q9Y6Q1	641 aa		7.74	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TMEM265	A0A087WTH1	108 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SHISA3	A0PJX4	238 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRIM43B	A6NCK2	446 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	C2orf71	A6NGG8	1288 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	STXBP3	O00186	592 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MEIS1	O00470	390 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MPHOSPH10	O00566	681 aa	Known RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GPR39	O43194	453 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	STRN	O43815	780 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	PQBP1	O60828	265 aa	Known RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ITGB2	P05107	769 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRIM27	P14373	513 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SHMT1	P34896	483 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ADCYAP1R1	P41586	468 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GPR85	P60893	370 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TNK2	Q07912	1038 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	PLS1	Q14651	629 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SNX17	Q15036	470 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	LRRC41	Q15345	812 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	DDX53	Q86TM3	631 aa	Known RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	IFNL3	Q8IZI9	196 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MFSD4A	Q8N468	514 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MAGEB6	Q8N7X4	407 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SHCBP1	Q8NEM2	672 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	OR2W6P	Q8NHA6	318 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FRS2	Q8WU20	508 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FRAT1	Q92837	279 aa	Predicted RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GATA6	Q92908	595 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TTC1	Q99614	292 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	PHF20	Q9BVI0	1012 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SPATC1L	Q9H0A9	340 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GPR108	Q9NPR9	543 aa		7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	DBNL	Q9UJU6	430 aa	Known RBP	7.73	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ARVCF	O00192	962 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	IPO8	O15397	1037 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MEFV	O15553	781 aa	Predicted RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ZEB2	O60315	1214 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	COBL	O75128	1261 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SURF6	O75683	361 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	FLOT1	O75955	427 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CLTB	P09497	229 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	RARB	P10826	455 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SRF	P11831	508 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	BPI	P17213	487 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	GUCY1A3	Q02108	690 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TLE2	Q04725	743 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MAP3K12	Q12852	859 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	KCNAB2	Q13303	367 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	COG2	Q14746	738 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	STAT4	Q14765	748 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SEPT2	Q15019	361 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	CYP27C1	Q4G0S4	372 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	RCSD1	Q6JBY9	416 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	KCNT2	Q6UVM3	1135 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	ZAR1	Q86SH2	424 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MTDH	Q86UE4	582 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	SPATS2	Q86XZ4	545 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRMT2A	Q8IZ69	625 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	MB21D1	Q8N884	522 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	USP7	Q93009	1102 aa		7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	HEXIM2	Q96MH2	286 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	TRIT1	Q9H3H1	467 aa	Known RBP	7.72	□□□□□ -1.17
SMARCA2-223	ENST00000634435	IFT22	Q9H7X7	185 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms