RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SPON1Q9HCB6 807 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 RBAKQ9NYW8 714 aaPredicted RBP13.72□□□□□ -0.21
MSH6-215ENST00000622629 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 TRAF3IP3Q9Y228 551 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 MAD1L1Q9Y6D9 718 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 NID2Q14112 1375 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 CNGA1P29973 690 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
MSH6-215ENST00000622629 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.21
MSH6-215ENST00000622629 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
MSH6-215ENST00000622629 AGO2Q9UKV8 859 aaKnown RBP13.72□□□□□ -0.21
MSH6-215ENST00000622629 SLC12A3P55017 1021 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 SLFN12LQ6IEE8 588 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 CARD9Q9H257 536 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
MSH6-215ENST00000622629 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
MSH6-215ENST00000622629 RASA4BC9J798 803 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 RASA4O43374 803 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 NR3C2P08235 984 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 Q4G0T1 1027 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 ANKRD36BP1Q96IX9 119 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 CFAP57Q96MR6 1250 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.71□□□□□ -0.21
MSH6-215ENST00000622629 SLIT2O94813 1529 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.217e-19■■■■■ 42.4
MSH6-215ENST00000622629 MEIS2O14770 477 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 RGL2O15211 777 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 SLITRK3O94933 977 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
MSH6-215ENST00000622629 SLC8A3P57103 927 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 LGSNQ5TDP6 509 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 CCDC110Q8TBZ0 833 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 SCINQ9Y6U3 715 aa13.71□□□□□ -0.21
MSH6-215ENST00000622629 NFIBO00712 420 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.22
MSH6-215ENST00000622629 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.22
MSH6-215ENST00000622629 STXBP2Q15833 593 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 C9orf72Q96LT7 481 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 RILPQ96NA2 401 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.22
MSH6-215ENST00000622629 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 HESX1Q9UBX0 185 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 SYNJ2BP-COX16A0A087WUM0 186 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 TMEM150BA6NC51 233 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 PJA2O43164 708 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 PHF2O75151 1096 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 SGPL1O95470 568 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.22
MSH6-215ENST00000622629 KCTD2Q14681 263 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 ICE2Q659A1 982 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 SULF1Q8IWU6 871 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 TMEM35BQ8NCS4 154 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 AENQ8WTP8 325 aaKnown RBP13.71□□□□□ -0.22
MSH6-215ENST00000622629 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 COX16Q9P0S2 106 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 AKT3Q9Y243 479 aa13.71□□□□□ -0.22
MSH6-215ENST00000622629 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 I3L4J1 428 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 CDO1Q16878 200 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 LONRF1Q17RB8 773 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 C7orf31Q8N865 590 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 FBXO25Q8TCJ0 367 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 HVCN1Q96D96 273 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 C18orf8Q96DM3 657 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 APOL6Q9BWW8 343 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 INHBAP08476 426 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 PSMA2P25787 234 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 NEDD9Q14511 834 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 OTOP1Q7RTM1 612 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 PITPNM3Q9BZ71 974 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
MSH6-215ENST00000622629 LCMT1Q9UIC8 334 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 INTUQ9ULD6 942 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 ZNRF3Q9ULT6 936 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 TTLL3Q9Y4R7 772 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 LDHAP00338 332 aaKnown RBP13.7□□□□□ -0.22
MSH6-215ENST00000622629 CHN1P15882 459 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 CORO7P57737 925 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 SLC35G1Q2M3R5 365 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 SESTD1Q86VW0 696 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 PYROXD1Q8WU10 500 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 SREK1Q8WXA9 508 aaKnown RBP13.7□□□□□ -0.22
MSH6-215ENST00000622629 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
MSH6-215ENST00000622629 TMX2Q9Y320 296 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms