RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CAND2O75155 1236 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 CSTF2P33240 577 aaKnown RBP eCLIP3.27□□□□□ -1.89
NEB-220ENST00000618972 HOXD13P35453 343 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 PALB2Q86YC2 1186 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 DIS3LQ8TF46 1054 aaKnown RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 KLF6Q99612 283 aaPredicted RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 JCADQ9P266 1359 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 FTLP02792 175 aaPredicted RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 PYGMP11217 842 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 CHRNDQ07001 517 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 KRT71Q3SY84 523 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 RNF169Q8NCN4 708 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 KAT5Q92993 513 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 ZFRQ96KR1 1074 aaKnown RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 TMEM47Q9BQJ4 181 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 DMAP1Q9NPF5 467 aaPredicted RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 ETAA1Q9NY74 926 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 ANAPC5Q9UJX4 755 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 TMA7Q9Y2S6 64 aaKnown RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 TMEM150BA6NC51 233 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 CCNT1O60563 726 aaKnown RBP3.27□□□□□ -1.89
NEB-220ENST00000618972 RASSF9O75901 435 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 NOL4O94818 638 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 IFNAR1P17181 557 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 CCT8P50990 548 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 COPZ1P61923 177 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 LRRC63Q05C16 580 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 SPARCL1Q14515 664 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 WASHC2DQ5SRD0 308 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 CRAMP1Q96RY5 1269 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 RWDD2AQ9UIY3 292 aa3.27□□□□□ -1.89
NEB-220ENST00000618972 C6orf229H3BNL8 230 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 MARK3P27448 753 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 EPHB4P54760 987 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 KCNJ2P63252 427 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 DMPKQ09013 629 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 AMIGO3Q86WK7 504 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ITPKCQ96DU7 683 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 AK8Q96MA6 479 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 EFCAB1Q9HAE3 211 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CACYBPQ9HB71 228 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 KIAA1024Q9UPX6 916 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 FOXN3O00409 490 aaPredicted RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 SLC5A1P13866 664 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 NCAPG2Q86XI2 1143 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 STKLD1Q8NE28 680 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.26□□□□□ -1.89
NEB-220ENST00000618972 PCDHB18PQ96TA0 734 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 SCN3BQ9NY72 215 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ANKRD63C9JTQ0 380 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PI4K2BG5E9Z4 385 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 MMP1P03956 469 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CYP19A1P11511 503 aaPredicted RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 FOXN2P32314 431 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PHKA2P46019 1235 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TBCCQ15814 346 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TTC8Q8TAM2 541 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ZIM3Q96PE6 472 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 BRIP1Q9BX63 1249 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 STX8Q9UNK0 236 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 FAM205AQ6ZU69 1335 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TDRD12Q587J7 1177 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 FAM219BQ5XKK7 198 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 KLRF2D3W0D1 207 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 M0R3G1 203 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ATP6V1E1P36543 226 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 SYN2Q92777 582 aaPredicted RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 PRPF18Q99633 342 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 CAAP1Q9H8G2 361 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 UBN1Q9NPG3 1134 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TMCO1Q9UM00 188 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 F5H423 210 aaPredicted RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 CSE1LP55060 971 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 PABPC4Q13310 644 aaKnown RBP eCLIP3.26□□□□□ -1.89
NEB-220ENST00000618972 PSMD6Q15008 389 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CEP78Q5JTW2 689 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 KCTD1Q719H9 257 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TRIM11Q96F44 468 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CDHR2Q9BYE9 1310 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 KIAA0586Q9BVV6 1533 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ANXA13P27216 316 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ROR2Q01974 943 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 IL31Q6EBC2 164 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 FAM161BQ96MY7 647 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 KRT37O76014 449 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 ELF1P32519 619 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TRAPPC10P48553 1259 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PAK1Q13153 545 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PDAP1Q13442 181 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 PTGISQ16647 500 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TAF2Q6P1X5 1199 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 TRAPPC11Q7Z392 1133 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 DDX47Q9H0S4 455 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 LGALS16A8MUM7 142 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 NMT1P30419 496 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 TUFMP49411 452 aaKnown RBP3.26□□□□□ -1.89
NEB-220ENST00000618972 COPS2P61201 443 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CSNK2BP67870 215 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 CADPS2Q86UW7 1296 aa3.26□□□□□ -1.89
NEB-220ENST00000618972 PDCD10Q9BUL8 212 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms