RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 RAD54LQ92698 747 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 TSG101Q99816 390 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 SEZ6LQ9BYH1 1024 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 NUCKS1Q9H1E3 243 aaKnown RBP7.58□□□□□ -1.2
CBWD3-214ENST00000618921 CPVLQ9H3G5 476 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 NHEJ1Q9H9Q4 299 aaPredicted RBP7.58□□□□□ -1.2
CBWD3-214ENST00000618921 PTPRHQ9HD43 1115 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 ST7Q9NRC1 585 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 RLFQ13129 1914 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 PIEZO1Q92508 2521 aa7.58□□□□□ -1.2
CBWD3-214ENST00000618921 LTBP2Q14767 1821 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ATAD5Q96QE3 1844 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MSCO60682 206 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 USO1O60763 962 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TTLL1O95922 423 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 FCER1AP12319 257 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 IGFBP4P22692 258 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ITGB8P26012 769 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MRPL12P52815 198 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CDC37Q16543 378 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TMEM119Q4V9L6 283 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 VWA3BQ502W6 1294 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MIIPQ5JXC2 388 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 GPATCH4Q5T3I0 446 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PAPD7Q5XG87 772 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PPP4R3AQ6IN85 833 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 WDR93Q6P2C0 686 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 C16orf46Q6P387 395 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SUGP1Q8IWZ8 645 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ARRDC4Q8NCT1 418 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 KIAA0895Q8NCT3 520 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 NPLOC4Q8TAT6 608 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 KHSRPQ92945 711 aaKnown RBP eCLIP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ERP27Q96DN0 273 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 EDEM3Q9BZQ6 932 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 BLOC1S4Q9NUP1 217 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CLIC5Q9NZA1 410 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SIRPGQ9P1W8 387 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ZNF69Q9UC07 566 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SAR1BQ9Y6B6 198 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SMCHD1A6NHR9 2005 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CHD7Q9P2D1 2997 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 FRMPD3Q5JV73 1810 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 BAZ2BQ9UIF8 2168 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MYH8P13535 1937 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 MYMKA6NI61 221 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 POLR3GO15318 223 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 KRT18P05783 430 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 HLA-DOAP06340 250 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 AKR1B1P15121 316 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 VAV2P52735 878 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ZNF543Q08ER8 600 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 KIF5AQ12840 1032 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 BRDTQ58F21 947 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PAF1Q8N7H5 531 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SNX29Q8TEQ0 813 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CUL5Q93034 780 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CCDC42Q96M95 316 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ARHGAP9Q9BRR9 750 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TRIM55Q9BYV6 548 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SLC39A2Q9NP94 309 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PDLIM7Q9NR12 457 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 SNTG2Q9NY99 539 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 CNTN3Q9P232 1028 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 PI4KBQ9UBF8 816 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 FRMPD2Q68DX3 1309 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-214ENST00000618921 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
CBWD3-214ENST00000618921 TARSL2A2RTX5 802 aaKnown RBP7.56□□□□□ -1.2
CBWD3-214ENST00000618921 SLC15A5A6NIM6 579 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 PRSS47A8MTI9 375 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 TACC1O75410 805 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 CNMDO75829 334 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 ASNSP08243 561 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 ADCYAP1R1P41586 468 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 MASP1P48740 699 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 USP14P54578 494 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 TLE2Q04725 743 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 CCDC70Q6NSX1 233 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 KIAA0907Q7Z7F0 614 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-214ENST00000618921 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
CBWD3-214ENST00000618921 ATXN2LQ8WWM7 1075 aaKnown RBP7.56□□□□□ -1.2
CBWD3-214ENST00000618921 EXOC4Q96A65 974 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 ASB2Q96Q27 587 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 PNKPQ96T60 521 aa7.56□□□□□ -1.2
CBWD3-214ENST00000618921 FAM126AQ9BYI3 521 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-214ENST00000618921 NT5C3AQ9H0P0 336 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms