RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 PRPF4BQ13523 1007 aaKnown RBP15.02□□□□□ -0.01
CBWD1-226ENST00000618061 LY6KQ17RY6 165 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 XKR3Q5GH77 459 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 ZBTB41Q5SVQ8 909 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 CPNE8Q86YQ8 564 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 GPD1LQ8N335 351 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 HELQQ8TDG4 1101 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 LMBR1Q8WVP7 490 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 ZNF516Q92618 1163 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 DCPSQ96C86 337 aaKnown RBP15.02□□□□□ -0.01
CBWD1-226ENST00000618061 HES6Q96HZ4 224 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 PBKQ96KB5 322 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 BTBD6Q96KE9 485 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 MFSD14AQ96MC6 490 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 PCYT2Q99447 389 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 VIPAS39Q9H9C1 493 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 TMEM8AQ9HCN3 771 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 RAB20Q9NX57 234 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 RNF181Q9P0P0 153 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 SUCLA2Q9P2R7 463 aaPredicted RBP15.02□□□□□ -0.01
CBWD1-226ENST00000618061 TMEM59LQ9UK28 342 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 NOCTQ9UK39 431 aaKnown RBP15.02□□□□□ -0.01
CBWD1-226ENST00000618061 NR2E1Q9Y466 385 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 LOC285556D6RIA3 1793 aa15.02□□□□□ -0.01
CBWD1-226ENST00000618061 ANKRD62A6NC57 917 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 OATP04181 439 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 RFX1P22670 979 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 GLRA2P23416 452 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 LIG4P49917 911 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 NLRP11P59045 1033 aaKnown RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SNRPFP62306 86 aaKnown RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SCARA3Q6AZY7 606 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 DDX42Q86XP3 938 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SULF1Q8IWU6 871 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SLC17A8Q8NDX2 589 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 CHST13Q8NET6 341 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SPATC1LQ9H0A9 340 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 GDF3Q9NR23 364 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 ARHGAP28Q9P2N2 729 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 MAFBQ9Y5Q3 323 aaPredicted RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 GSTTP1A0A1W2PQM5 241 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 PGRMC1O00264 195 aaKnown RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 KRIT1O00522 736 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 DKC1O60832 514 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 STAM2O75886 525 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 HARSP12081 509 aaKnown RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 MARK3P27448 753 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 LMAN1P49257 510 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SYCE1Q8N0S2 351 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 MSL3Q8N5Y2 521 aaKnown RBP15.01□□□□□ -0.01
CBWD1-226ENST00000618061 FBXL13Q8NEE6 735 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 DNERQ8NFT8 737 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 FAM71BQ8TC56 605 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 ACTRT1Q8TDG2 376 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 SCFD2Q8WU76 684 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 FBXL18Q96ME1 805 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 ACBD3Q9H3P7 528 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 C17orf75Q9HAS0 396 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 CTTNBP2NLQ9P2B4 639 aa15.01□□□□□ -0.01
CBWD1-226ENST00000618061 PTPRJQ12913 1337 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 CENPFP49454 3210 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 GOLGA6BA6NDN3 693 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 TTLL13PA6NNM8 815 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 KRT5P13647 590 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 SSTR3P32745 418 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 EPHB4P54760 987 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 MFAP3P55082 362 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 TTLL12Q14166 644 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 GLE1Q53GS7 698 aaKnown RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 TMEM63BQ5T3F8 832 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 SPOPLQ6IQ16 392 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 RIOX2Q8IUF8 465 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 IFT20Q8IY31 132 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 HVCN1Q96D96 273 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.01
CBWD1-226ENST00000618061 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 TXNRD2Q9NNW7 524 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 ANKFY1Q9P2R3 1169 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 AMACRQ9UHK6 382 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 MYPNQ86TC9 1320 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 ATG7O95352 703 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 ARIH2O95376 493 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 FGGP02679 453 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 CYP11B1P15538 503 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 MARCKSL1P49006 195 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.01
CBWD1-226ENST00000618061 GPC3P51654 580 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 TNNC1P63316 161 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 IRX3P78415 501 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 FMO1Q01740 532 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 Q3C1V9 767 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 BRDTQ58F21 947 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 PHLDB2Q86SQ0 1253 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 TRIM50Q86XT4 487 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 SHC3Q92529 594 aa15□□□□□ -0.01
CBWD1-226ENST00000618061 ZNF668Q96K58 619 aaPredicted RBP15□□□□□ -0.01
CBWD1-226ENST00000618061 NT5C1BQ96P26 610 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms