RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PPP6R3Q5H9R7 873 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 PDXDC1Q6P996 788 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 CATSPERGQ6ZRH7 1159 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 TADA2BQ86TJ2 420 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 DHX40Q8IX18 779 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 C4orf19Q8IY42 314 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 VPS52Q8N1B4 723 aa10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-208ENST00000615606 P4HA2O15460 535 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 UPP2O95045 317 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 APOEP02649 317 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 CYP2C8P10632 490 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 EPHB1P54762 984 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 GRB10Q13322 594 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 RGMBQ6NW40 437 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 RANBP17Q9H2T7 1088 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 EHD2Q9NZN4 543 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 AFG3L2Q9Y4W6 797 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 PCDHB7Q9Y5E2 793 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 GMNNO75496 209 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 NPTXRO95502 500 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 CPP00450 1065 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 PSMC4P43686 418 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 CCDC6Q16204 474 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 STARD7Q9NQZ5 370 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 APEX2Q9UBZ4 518 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 MED24O75448 989 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 KRT7P08729 469 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 PCSK1P29120 753 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 PNPLA4P41247 253 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 RECQLP46063 649 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 BASP1P80723 227 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 PTPAQ15257 358 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 CD302Q8IX05 232 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 RABGGTAQ92696 567 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 TEX33O43247 280 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 FTLP02792 175 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 DEFB115Q30KQ5 88 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 SLC30A10Q6XR72 485 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 CAPN12Q6ZSI9 719 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 TMEM8AQ9HCN3 771 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
CLTCL1-208ENST00000615606 F8W8V4 182 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 HOXA2O43364 376 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 APBA1Q02410 837 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 EFHC2Q5JST6 749 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 FAM102AQ5T9C2 384 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CCDC13Q8IYE1 715 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 RNF10Q8N5U6 811 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 HPCAL4Q9UM19 191 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 UBQLN1Q9UMX0 589 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 H3BRB1 525 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 NOGQ13253 232 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CEP85LQ5SZL2 805 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 RUSC1Q9BVN2 902 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 TUT1Q9H6E5 874 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CCDC188H7C350 402 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 IRF6O14896 467 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 INHBAP08476 426 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 KLRC1P26715 233 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CDK17Q00537 523 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 MICALL1Q8N3F8 863 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 AGPAT1Q99943 283 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 WDR35Q9P2L0 1181 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 GRIK1P39086 918 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 CLCN3P51790 818 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 GFPT1Q06210 699 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 PARVAQ9NVD7 372 aa10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 DBR1Q9UK59 544 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-208ENST00000615606 OGTO15294 1046 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 TRPA1O75762 1119 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 HLA-DRAP01903 254 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 LLGL1Q15334 1064 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 GDAP1L1Q96MZ0 367 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 A1CFQ9NQ94 594 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 CYP26A1O43174 497 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 PALMO75781 387 aa10.05□□□□□ -0.8
CLTCL1-208ENST00000615606 CXCR5P32302 372 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms