RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 TRIM6Q9C030 488 aaPredicted RBP24.27■■□□□ 1.48
SCUBE1-208ENST00000615096 CD44P16070 742 aaKnown RBP24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 NOLC1Q14978 699 aaKnown RBP eCLIP24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 PRPF38BQ5VTL8 546 aaKnown RBP24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 APBB1IPQ7Z5R6 666 aaPredicted RBP24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 TDHQ8IZJ6 230 aa24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 NXF3Q9H4D5 531 aaKnown RBP24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 HES2Q9Y543 173 aa24.26■■□□□ 1.47
SCUBE1-208ENST00000615096 PPP1R3GB7ZBB8 358 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 PDXKO00764 312 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 FAM189A1O60320 539 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 STAG3L1P0CL83 205 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 GARTP22102 1010 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 SNRPFP62306 86 aaKnown RBP24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 TMCO2Q7Z6W1 182 aaPredicted RBP24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 CEP120Q8N960 986 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 RNF39Q9H2S5 420 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 AGPAT3Q9NRZ7 376 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 TYW1Q9NV66 732 aaKnown RBP24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 RNF216Q9NWF9 866 aaPredicted RBP24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 CGNQ9P2M7 1197 aaKnown RBP24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 PCDHB7Q9Y5E2 793 aa24.25■■□□□ 1.47
SCUBE1-208ENST00000615096 PTPRSQ13332 1948 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 MEIS3P2A8K0S8 358 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 UPP2O95045 317 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 ATP2A2P16615 1042 aaKnown RBP24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 PPP1R2P41236 205 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 GRM5P41594 1212 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 MATR3P43243 847 aaKnown RBP eCLIP24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 AGMOQ6ZNB7 445 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 POMGNT1Q8WZA1 660 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 LPPQ93052 612 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 PGBD4Q96DM1 585 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 CBWD1Q9BRT8 395 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 SEMA6BQ9H3T3 888 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 RNF19AQ9NV58 838 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 LRFN2Q9ULH4 789 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 TRAF3IP3Q9Y228 551 aa24.24■■□□□ 1.47
SCUBE1-208ENST00000615096 OGTO15294 1046 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 HARSP12081 509 aaKnown RBP24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 ITGA4P13612 1032 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 IBSPP21815 317 aaPredicted RBP24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 NLRP12P59046 1061 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 ZCWPW2Q504Y3 356 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 CENPPQ6IPU0 288 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 ARMCX5Q6P1M9 558 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 HS2ST1Q7LGA3 356 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 HERC6Q8IVU3 1022 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 C12orf56Q8IXR9 622 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 THNSL1Q8IYQ7 743 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 RNF169Q8NCN4 708 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 MSTO1Q9BUK6 570 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 SNTG2Q9NY99 539 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 AGO2Q9UKV8 859 aaKnown RBP24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 TTC3P53804 2025 aa24.23■■□□□ 1.47
SCUBE1-208ENST00000615096 DGKIO75912 1065 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 GJB5O95377 273 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 FGFR1P11362 822 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 STIM1Q13586 685 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 SEZ6Q53EL9 994 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 TMEM192Q8IY95 271 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 GOLGA5Q8TBA6 731 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 TMEM174Q8WUU8 243 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 DHTKD1Q96HY7 919 aaPredicted RBP24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 PCIF1Q9H4Z3 704 aa24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 COLQQ9Y215 455 aaPredicted RBP24.22■■□□□ 1.47
SCUBE1-208ENST00000615096 CLIC2O15247 247 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 AKAP5P24588 427 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 DPCR1Q3MIW9 517 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 CLLU1OSQ5K130 101 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 ZBTB41Q5SVQ8 909 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 FAM109BQ6ICB4 259 aaPredicted RBP24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 FAM117BQ6P1L5 589 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 HACE1Q8IYU2 909 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 MLKLQ8NB16 471 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 ZSWIM2Q8NEG5 633 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 ZNF689Q96CS4 500 aaPredicted RBP24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 APOL6Q9BWW8 343 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 RC3H2Q9HBD1 1191 aaKnown RBP24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 UBN1Q9NPG3 1134 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 GIT1Q9Y2X7 761 aa24.21■■□□□ 1.47
SCUBE1-208ENST00000615096 PDE4DIPQ5VU43 2346 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 A0A1W2PPC1 479 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 PSMA7O14818 248 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 KIAA0391O15091 583 aaKnown RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 CALUO43852 315 aaPredicted RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 CCNE1P24864 410 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 TNFSF9P41273 254 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 PMS1P54277 932 aaKnown RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 OSTNP61366 133 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 HTRA4P83105 476 aaPredicted RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 NFIL3Q16649 462 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 KYAT1Q16773 422 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 CRELD2Q6UXH1 353 aaPredicted RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 SLC9A9Q8IVB4 645 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 P2RX5Q93086 422 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 CCDC94Q9BW85 323 aaPredicted RBP24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 RSAD1Q9HA92 442 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 DMAC2Q9NW81 257 aa24.2■■□□□ 1.46
SCUBE1-208ENST00000615096 HSPBP1Q9NZL4 362 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms