RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
MDC1-209ENST00000613547 KLRC4O43908 158 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 RHOBTB3O94955 611 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 HARSP12081 509 aaKnown RBP14.51□□□□□ -0.09
MDC1-209ENST00000613547 MYOGP15173 224 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 PROZP22891 400 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 CASP5P51878 434 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 MCL1Q07820 350 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 PNOCQ13519 176 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 KCNB1Q14721 858 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 NOLC1Q14978 699 aaKnown RBP eCLIP14.51□□□□□ -0.09
MDC1-209ENST00000613547 KYAT1Q16773 422 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 PAN2Q504Q3 1202 aaKnown RBP14.51□□□□□ -0.09
MDC1-209ENST00000613547 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 LRRC43Q8N309 656 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 HELQQ8TDG4 1101 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 LPPQ93052 612 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 HPS3Q969F9 1004 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 SMARCE1Q969G3 411 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 SAMD11Q96NU1 681 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 GSDMAQ96QA5 445 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 STRA6Q9BX79 667 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 PTPRHQ9HD43 1115 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 TOPORSQ9NS56 1045 aaPredicted RBP14.51□□□□□ -0.09
MDC1-209ENST00000613547 LMBRD1Q9NUN5 540 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 GIT1Q9Y2X7 761 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 RWDD3Q9Y3V2 267 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 HES2Q9Y543 173 aa14.51□□□□□ -0.09
MDC1-209ENST00000613547 ZMYM2Q9UBW7 1377 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 LCHNA4D1U4 455 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 LINC01553A4QN01 128 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
MDC1-209ENST00000613547 GRM5P41594 1212 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 GATMP50440 423 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 RNASELQ05823 741 aaKnown RBP14.5□□□□□ -0.09
MDC1-209ENST00000613547 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 CLLU1OSQ5K130 101 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 SPOUT1Q5T280 376 aaKnown RBP14.5□□□□□ -0.09
MDC1-209ENST00000613547 ZNF697Q5TEC3 545 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 AGMOQ6ZNB7 445 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 HS2ST1Q7LGA3 356 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 ZNF507Q8TCN5 953 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 LRCH3Q96II8 777 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 TGS1Q96RS0 853 aaKnown RBP14.5□□□□□ -0.09
MDC1-209ENST00000613547 RPS6KC1Q96S38 1066 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 FGFBP2Q9BYJ0 223 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 GBP3Q9H0R5 595 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 RC3H2Q9HBD1 1191 aaKnown RBP14.5□□□□□ -0.09
MDC1-209ENST00000613547 KANSL3Q9P2N6 904 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 INPP5FQ9Y2H2 1132 aa14.5□□□□□ -0.09
MDC1-209ENST00000613547 CARNS1A5YM72 827 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 OFD1O75665 1012 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 CLTAP09496 248 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 AKAP5P24588 427 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 MLH1P40692 756 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 KCNA1Q09470 495 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 STK4Q13043 487 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
MDC1-209ENST00000613547 EPM2AIP1Q7L775 607 aaPredicted RBP14.49□□□□□ -0.09
MDC1-209ENST00000613547 THNSL1Q8IYQ7 743 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
MDC1-209ENST00000613547 ACAP3Q96P50 834 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 CASD1Q96PB1 797 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 MSTO1Q9BUK6 570 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 AAASQ9NRG9 546 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 SNTG2Q9NY99 539 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 GDAQ9Y2T3 454 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 PCDHA5Q9Y5H7 936 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 COL4A6Q14031 1691 aa14.49□□□□□ -0.09
MDC1-209ENST00000613547 TTC3P53804 2025 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 A0A0B4J269 797 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 ARL5CA6NH57 179 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 MEIS3P2A8K0S8 358 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 ANKRD63C9JTQ0 380 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 ABLIM1O14639 778 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 KIAA0391O15091 583 aaKnown RBP14.48□□□□□ -0.09
MDC1-209ENST00000613547 OGTO15294 1046 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 RECQL4O94761 1208 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 MBD3O95983 291 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
MDC1-209ENST00000613547 OSTNP61366 133 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 SNRPFP62306 86 aaKnown RBP14.48□□□□□ -0.09
MDC1-209ENST00000613547 TAP1Q03518 808 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 BMT2Q1RMZ1 405 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 NELFCDQ8IXH7 590 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 GLIS3Q8NEA6 775 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 SPATA20Q8TB22 786 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 GOLGA5Q8TBA6 731 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 SCFD1Q8WVM8 642 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 FAM193BQ96PV7 902 aaPredicted RBP14.48□□□□□ -0.09
MDC1-209ENST00000613547 GAD1Q99259 594 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 ZNF576Q9H609 170 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 RNF19AQ9NV58 838 aa14.48□□□□□ -0.09
MDC1-209ENST00000613547 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
MDC1-209ENST00000613547 CGNQ9P2M7 1197 aaKnown RBP14.48□□□□□ -0.09
MDC1-209ENST00000613547 AGO2Q9UKV8 859 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms