RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RDM1Q8NG50 284 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 PRPF31Q8WWY3 499 aaKnown RBP7.77□□□□□ -1.16
CSDE1-218ENST00000610726 USP20Q9Y2K6 914 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 HEY1Q9Y5J3 304 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 TACC3Q9Y6A5 838 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 IRF6O14896 467 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 CALB1P05937 261 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 FGRP09769 529 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 SUPT20HL2P0C7V6 817 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 ATP11AP98196 1134 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 LAMC2Q13753 1193 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 LY6KQ17RY6 165 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 FAM102AQ5T9C2 384 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF720Q7Z2F6 126 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 KCTD17Q8N5Z5 321 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 FAM71BQ8TC56 605 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 BCAS4Q8TDM0 211 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 RNF139Q8WU17 664 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 RUNDC3BQ96NL0 473 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 EFCC1Q9HA90 598 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 MAP3K20Q9NYL2 800 aaKnown RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 PPP2R3BQ9Y5P8 575 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 MRFAP1Q9Y605 127 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 RNF40O75150 1001 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 RARRES1P49788 294 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 MNAT1P51948 309 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 SLC12A2P55011 1212 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 NOP14P78316 857 aaKnown RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 NKX2-3Q8TAU0 364 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 TBC1D31Q96DN5 1066 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 MS4A14Q96JA4 679 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 POP1Q99575 1024 aaKnown RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 ASCC2Q9H1I8 757 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 TTC7AQ9ULT0 858 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-218ENST00000610726 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 CACNA1FO60840 1977 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 ATRNO75882 1429 aa7.77□□□□□ -1.17
CSDE1-218ENST00000610726 A6NNZ2 444 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 GOLGA8KD6RF30 607 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ACSL3O95573 720 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 KLRC1P26715 233 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 SDC4P31431 198 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 GBP1P32455 592 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ERVK-24P63145 666 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 DGKDQ16760 1214 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TUBB8Q3ZCM7 444 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 CDKAL1Q5VV42 579 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 B4GALNT4Q76KP1 1039 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 DNAAF3Q8N9W5 541 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 SPATA4Q8NEY3 305 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 SLC35G2Q8TBE7 412 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 HAS1Q92839 578 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 MTMR9Q96QG7 549 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 CAPS2Q9BXY5 557 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 SMARCAL1Q9NZC9 954 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 BCL9LQ86UU0 1499 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 A0A087X0T9 212 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 KIAA0391O15091 583 aaKnown RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ATMINO43313 823 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ZBED1O96006 694 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 FAM228BP0C875 321 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 E2F4Q16254 413 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TRIM65Q6PJ69 517 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 VSIG1Q86XK7 387 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 RBBP8NLQ8NC74 664 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 GLIS3Q8NEA6 775 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 MROH8Q9H579 483 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 STRIP2Q9ULQ0 834 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 DUSP10Q9Y6W6 482 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ARHGEF37A1IGU5 675 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 PDGFRBP09619 1106 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 KCNJ6P48051 423 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 RGS7P49802 495 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 AP3M2P53677 418 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM132DQ14C87 1099 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 C4orf19Q8IY42 314 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 GABPB2Q8TAK5 448 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 GTF3C2Q8WUA4 911 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 AFG1LQ8WV93 481 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ATP2A3Q93084 1043 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 CDCA5Q96FF9 252 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM8AQ9HCN3 771 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 AMACRQ9UHK6 382 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 SNX12Q9UMY4 172 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ADAMTSL3P82987 1691 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 PI4K2BG5E9Z4 385 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 PDHXO00330 501 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 FOXN3O00409 490 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 CXCL11O14625 94 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 ASAP2O43150 1006 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 RTN2O75298 545 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TJP3O95049 919 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 BMP6P22004 513 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 MKRN4PQ13434 485 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 RWDD4Q6NW29 188 aaKnown RBP7.76□□□□□ -1.17
CSDE1-218ENST00000610726 TATDN1Q6P1N9 297 aa7.76□□□□□ -1.17
CSDE1-218ENST00000610726 MMS22LQ6ZRQ5 1243 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms