RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	PRR23B	Q6ZRT6	265 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	SRGAP1	Q7Z6B7	1085 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	HACE1	Q8IYU2	909 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	SLC5A5	Q92911	643 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	LENG9	Q96B70	501 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	APOL6	Q9BWW8	343 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	TRIM6	Q9C030	488 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	IFT122	Q9HBG6	1241 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	PARD6A	Q9NPB6	346 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	CHST7	Q9NS84	486 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	FNIP2	Q9P278	1114 aa		13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	CNOT1	A5YKK6	2376 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-223	ENST00000601665	MYH15	Q9Y2K3	1946 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	KLF18	A0A0U1RQI7	1052 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	CCDC196	A0A1B0GTZ2	297 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665		F8W810	466 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	SLC30A4	O14863	429 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	TADA2A	O75478	443 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	PAPLN	O95428	1278 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	TARS	P26639	723 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	RPS9	P46781	194 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	NTHL1	P78549	312 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	FGD1	P98174	961 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	AKAP17A	Q02040	695 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	LAIR1	Q6GTX8	287 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	LILRA6	Q6PI73	481 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	GPR65	Q8IYL9	337 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	RNF168	Q8IYW5	571 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	PSPC1	Q8WXF1	523 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	GJA10	Q969M2	543 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	ANGPTL2	Q9UKU9	493 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	IPP	Q9Y573	584 aa		13.72	□□□□□ -0.21
NUP62-223	ENST00000601665	PATJ	Q8NI35	1801 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	CCL16	O15467	120 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	C8A	P07357	584 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	RET	P07949	1114 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	TGM1	P22735	817 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	DSC1	Q08554	894 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	ADCY1	Q08828	1119 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	MTAP	Q13126	283 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	UBXN11	Q5T124	520 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	RNF20	Q5VTR2	975 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	PLA2G4F	Q68DD2	849 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	EXOC8	Q8IYI6	725 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	CELF5	Q8N6W0	485 aa	Known RBP	13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	SMG8	Q8ND04	991 aa	Known RBP	13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	CCDC148	Q8NFR7	591 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	PRPF31	Q8WWY3	499 aa	Known RBP	13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	DDX1	Q92499	740 aa	Known RBP	13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	NELL1	Q92832	810 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	CLDN23	Q96B33	292 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	ZFP42	Q96MM3	310 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	TCEANC2	Q96MN5	208 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	GPR62	Q9BZJ7	368 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	PRMT8	Q9NR22	394 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	FBXW11	Q9UKB1	542 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	ADAM28	Q9UKQ2	775 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	BRPF3	Q9ULD4	1205 aa		13.71	□□□□□ -0.21
NUP62-223	ENST00000601665	WDR81	Q562E7	1941 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	LRP3	O75074	770 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	CDC27	P30260	824 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	HOXA11	P31270	313 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	USP11	P51784	963 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	PSMC5	P62195	406 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	LAMTOR4	Q0VGL1	99 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	IL31	Q6EBC2	164 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	NOTUM	Q6P988	496 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	ANO5	Q75V66	913 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	CEP57	Q86XR8	500 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	ITFG1	Q8TB96	612 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	TMEM143	Q96AN5	459 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	CCDC51	Q96ER9	411 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	CEP170P1	Q96L14	293 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	MBOAT7	Q96N66	472 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	CEP89	Q96ST8	783 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	EIF2A	Q9BY44	585 aa	Known RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	LSG1	Q9H089	658 aa	Known RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	RNF39	Q9H2S5	420 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	MINDY3	Q9H8M7	445 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	ANO2	Q9NQ90	1003 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	NDRG2	Q9UN36	371 aa	Known RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	HES2	Q9Y543	173 aa		13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.7	□□□□□ -0.22
NUP62-223	ENST00000601665	COL4A3	Q01955	1670 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	ADAMTS3	O15072	1205 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	DKC1	O60832	514 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	PSMD10	O75832	226 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	EFEMP2	O95967	443 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	PABPC1L	Q4VXU2	614 aa	Known RBP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	RNF149	Q8NC42	400 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	TCP11	Q8WWU5	503 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	ING5	Q8WYH8	240 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	TTPAL	Q9BTX7	342 aa		13.69	□□□□□ -0.22
NUP62-223	ENST00000601665	SLK	Q9H2G2	1235 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms