RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SOD2P04179 222 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 PRKCBP05771 671 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 EPCAMP16422 314 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 CDC25AP30304 524 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 OR1G1P47890 313 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 ITIH3Q06033 890 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 KIFC3Q9BVG8 833 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 ADAM7Q9H2U9 754 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 POLD4Q9HCU8 107 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 DNM3Q9UQ16 869 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 SMC3Q9UQE7 1217 aa25.01■■□□□ 1.59
SSBP4-209ENST00000601357 PRG3Q9Y2Y8 225 aaPredicted RBP25.01■■□□□ 1.59
SSBP4-209ENST00000601357 H3BQV1 296 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 N4BP3O15049 544 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 EFNA5P52803 228 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 GRIK3Q13003 919 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 KCNK18Q7Z418 384 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 DAW1Q8N136 415 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 IFT74Q96LB3 600 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 HERC2P3Q9BVR0 1158 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 DZANK1Q9NVP4 752 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 USP20Q9Y2K6 914 aa25■■□□□ 1.59
SSBP4-209ENST00000601357 ZSCAN21Q9Y5A6 473 aaPredicted RBP25■■□□□ 1.59
SSBP4-209ENST00000601357 F8W810 466 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 CNPP09543 421 aaKnown RBP24.99■■□□□ 1.59
SSBP4-209ENST00000601357 HYIQ5T013 277 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 TAS1R1Q7RTX1 841 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 PPFIBP1Q86W92 1011 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 RPGRIP1Q96KN7 1286 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 KLHL5Q96PQ7 755 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 MRPL17Q9NRX2 175 aaKnown RBP24.99■■□□□ 1.59
SSBP4-209ENST00000601357 KLK14Q9P0G3 267 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 DAXXQ9UER7 740 aaPredicted RBP24.99■■□□□ 1.59
SSBP4-209ENST00000601357 PARP2Q9UGN5 583 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 CDH22Q9UJ99 828 aa24.99■■□□□ 1.59
SSBP4-209ENST00000601357 SSBP05455 408 aaKnown RBP eCLIP24.98■■□□□ 1.59
SSBP4-209ENST00000601357 CLCN4P51793 760 aa24.98■■□□□ 1.59
SSBP4-209ENST00000601357 EEF1DP3Q658K8 133 aa24.98■■□□□ 1.59
SSBP4-209ENST00000601357 ARL6IP4Q66PJ3 421 aaKnown RBP24.98■■□□□ 1.59
SSBP4-209ENST00000601357 TMEM87AQ8NBN3 555 aa24.98■■□□□ 1.59
SSBP4-209ENST00000601357 EMILIN2Q9BXX0 1053 aa24.98■■□□□ 1.59
SSBP4-209ENST00000601357 NR1I2O75469 434 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 MAPK7Q13164 816 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 NT5DC1Q5TFE4 455 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 KIAA0319Q5VV43 1072 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 CES5AQ6NT32 575 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 RINT1Q6NUQ1 792 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 C1orf186Q6ZWK4 172 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 KCTD17Q8N5Z5 321 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 NECTIN4Q96NY8 510 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 RPS6KC1Q96S38 1066 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 RUSC1Q9BVN2 902 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 COLEC11Q9BWP8 271 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 POMKQ9H5K3 350 aa24.97■■□□□ 1.59
SSBP4-209ENST00000601357 PTGESO14684 152 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 URODP06132 367 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 LIG1P18858 919 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 NPTX2P47972 431 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 CUL4AQ13619 759 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 LARP1BQ659C4 914 aaKnown RBP24.96■■□□□ 1.59
SSBP4-209ENST00000601357 C12orf76Q8N812 135 aaPredicted RBP24.96■■□□□ 1.59
SSBP4-209ENST00000601357 EDAQ92838 391 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 PNMA5Q96PV4 448 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 ADPGKQ9BRR6 497 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 CHST7Q9NS84 486 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 SNTG2Q9NY99 539 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 SSX2IPQ9Y2D8 614 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 ARIH1Q9Y4X5 557 aaPredicted RBP24.96■■□□□ 1.59
SSBP4-209ENST00000601357 PLXNA3P51805 1871 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 DENND4AQ7Z401 1863 aa24.96■■□□□ 1.59
SSBP4-209ENST00000601357 PHLPP2Q6ZVD8 1323 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 HIP1RO75146 1068 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 RECQL4O94761 1208 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 KLRC2P26717 231 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 MTHFRP42898 656 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 GLUD2P49448 558 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 PEX3P56589 373 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 DSG1Q02413 1049 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 NAB2Q15742 525 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 TMEM132AQ24JP5 1023 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 DCAF4L1Q3SXM0 396 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 RARS2Q5T160 578 aaKnown RBP24.95■■□□□ 1.58
SSBP4-209ENST00000601357 KANK3Q6NY19 840 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 DRC1Q96MC2 740 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 CXCL16Q9H2A7 254 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 RXFP1Q9HBX9 757 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 ARHGAP28Q9P2N2 729 aa24.95■■□□□ 1.58
SSBP4-209ENST00000601357 VWA3AA6NCI4 1184 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 K7ERI5 159 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 C2CD2LO14523 706 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 GUCY2CP25092 1073 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 TUSC3Q13454 348 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 ATF7IP2Q5U623 682 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 KIAA1841Q6NSI8 718 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 CABP7Q86V35 215 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 FBXL18Q96ME1 805 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 RIPOR3Q96MK2 946 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 PAAF1Q9BRP4 392 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 TIPINQ9BVW5 301 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 GPR62Q9BZJ7 368 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms