RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OLFML3Q9NRN5 406 aa21.43■■□□□ 1.02
SHKBP1-221ENST00000599833 TBX20Q9UMR3 447 aa21.43■■□□□ 1.02
SHKBP1-221ENST00000599833 ZMYM2Q9UBW7 1377 aa21.43■■□□□ 1.02
SHKBP1-221ENST00000599833 PDCD11Q14690 1871 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-221ENST00000599833 ARL5CA6NH57 179 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 K7ENM7 598 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 RB1P06400 928 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 SLFN14P0C7P3 912 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 ITGA4P13612 1032 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 FOSL2P15408 326 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 AKAP5P24588 427 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 DNAJB1P25685 340 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 NOMO2Q5JPE7 1267 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 ZNF280BQ86YH2 543 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 MAP4K3Q8IVH8 894 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 FAM178BQ8IXR5 827 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 GRAMD1CQ8IYS0 662 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 RSPH1Q8WYR4 309 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 P2RX5Q93086 422 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 PLVAPQ9BX97 442 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 NRDE2Q9H7Z3 1164 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 SEL1LQ9UBV2 794 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 PLAGL2Q9UPG8 496 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 GIT1Q9Y2X7 761 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 RWDD3Q9Y3V2 267 aa21.42■■□□□ 1.02
SHKBP1-221ENST00000599833 CITO14578 2027 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 GRM6O15303 877 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 FAM189A1O60320 539 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 DDHD2O94830 711 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 ITGB1P05556 798 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 GAP43P17677 238 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 PBX3P40426 434 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 KCNA1Q09470 495 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 COASYQ13057 564 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 DCAF4L1Q3SXM0 396 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 GLB1LQ6UWU2 654 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 ZPBP2Q6X784 338 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 KLHL23Q8NBE8 558 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 GLIS3Q8NEA6 775 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 GAD1Q99259 594 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 SNTG2Q9NY99 539 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
SHKBP1-221ENST00000599833 PTGESO14684 152 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 KLRC4O43908 158 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 TOM1L1O75674 476 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 SCP2P22307 547 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 MLH1P40692 756 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 MCL1Q07820 350 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 GPM6BQ13491 265 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 CUL4BQ13620 913 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 NAB2Q15742 525 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 TMEM173Q86WV6 379 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 ABI1Q8IZP0 508 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 FSIP1Q8NA03 581 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 ENGASEQ8NFI3 743 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 SPPL3Q8TCT6 385 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 BCL7CQ8WUZ0 217 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 HPS3Q969F9 1004 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 PAGE5Q96GU1 130 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 APOL6Q9BWW8 343 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 MRPL9Q9BYD2 267 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 TRIM6Q9C030 488 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 ZHX3Q9H4I2 956 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 UBN1Q9NPG3 1134 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 DNAJB4Q9UDY4 337 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 INPP5FQ9Y2H2 1132 aa21.4■■□□□ 1.02
SHKBP1-221ENST00000599833 ANK1P16157 1881 aa21.39■■□□□ 1.02
SHKBP1-221ENST00000599833 BRWD1Q9NSI6 2320 aa21.39■■□□□ 1.02
SHKBP1-221ENST00000599833 H0YCG3 227 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 RECQL4O94761 1208 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 POMCP01189 267 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 MYBP10242 640 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 SCNN1GP51170 649 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 DSC1Q08554 894 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 STRN3Q13033 797 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 XKR4Q5GH76 650 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 MPZL3Q6UWV2 235 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 SLC39A11Q8N1S5 342 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 MRPS27Q92552 414 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 GAS2L1Q99501 681 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 PYM1Q9BRP8 204 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 BLZF1Q9H2G9 400 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 TBC1D7Q9P0N9 293 aa21.39■■□□□ 1.01
SHKBP1-221ENST00000599833 TISP43B9A030 160 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 MCF2P10911 925 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 IDEP14735 1019 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 LAG3P18627 525 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 HOXD13P35453 343 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 GRM5P41594 1212 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 SYKP43405 635 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 BCAR1P56945 870 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 SNW1Q13573 536 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 ZNF568Q3ZCX4 644 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 KCNT2Q6UVM3 1135 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 ALKAL1Q6UXT8 129 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 EPM2AIP1Q7L775 607 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 COLGALT2Q8IYK4 626 aa21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 FMR1NBQ8N0W7 255 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-221ENST00000599833 TMEM87AQ8NBN3 555 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms