RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 ZFP42Q96MM3 310 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 TMEM175Q9BSA9 504 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 IGFLR1Q9H665 355 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 DNAJB4Q9UDY4 337 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 K7ENM7 598 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 PPP6R2O75170 966 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 NR1I2O75469 434 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 RECQL4O94761 1208 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 GALTP07902 379 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 NRIP1P48552 1158 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 SLC11A1P49279 550 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 NDUFV1P49821 464 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 KCNQ1P51787 676 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 PKP1Q13835 747 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 BECN1Q14457 450 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 SMC1AQ14683 1233 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 TMC7Q7Z402 723 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 TLE6Q9H808 572 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 PARVGQ9HBI0 331 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 TNFSF13BQ9Y275 285 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
PDE4C-213ENST00000598111 PDCD11Q14690 1871 aaKnown RBP13.54□□□□□ -0.24
PDE4C-213ENST00000598111 H3BQ06 376 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 DLL1O00548 723 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 FSCN2O14926 492 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 B4GALT3O60512 393 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 DDHD2O94830 711 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 SRGAP2BP0DMP2 458 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 OR1G1P47890 313 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 ERVFC1P60507 584 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 DDX53Q86TM3 631 aaKnown RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 BICD1Q96G01 975 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 CDT1Q9H211 546 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 STK39Q9UEW8 545 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 PRG3Q9Y2Y8 225 aaPredicted RBP13.53□□□□□ -0.24
PDE4C-213ENST00000598111 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
PDE4C-213ENST00000598111 TCHHQ07283 1943 aa13.52□□□□□ -0.24
PDE4C-213ENST00000598111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 TBX10O75333 385 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 ALDH2P05091 517 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 MAPTP10636 758 aaKnown RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 HARSP12081 509 aaKnown RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 SCP2P22307 547 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 ABCD1P33897 745 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 DDIT3P35638 169 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 NCKAP1LP55160 1127 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 DSC1Q08554 894 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 LEXMQ3ZCV2 418 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 MPZL3Q6UWV2 235 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 SV2BQ7L1I2 683 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 EFHBQ8N7U6 833 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 NTPCRQ9BSD7 190 aaKnown RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 TCHPQ9BT92 498 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 TOPORSQ9NS56 1045 aaPredicted RBP13.52□□□□□ -0.25
PDE4C-213ENST00000598111 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 FAM50BQ9Y247 325 aa13.52□□□□□ -0.25
PDE4C-213ENST00000598111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.51□□□□□ -0.25
PDE4C-213ENST00000598111 NRP1O14786 923 aa13.51□□□□□ -0.25
PDE4C-213ENST00000598111 LINC01565O15544 149 aa13.51□□□□□ -0.25
PDE4C-213ENST00000598111 CUTAO60888 179 aa13.51□□□□□ -0.25
PDE4C-213ENST00000598111 MCF2P10911 925 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms