RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 HES2Q9Y543 173 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 IPPQ9Y573 584 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 STYXL1Q9Y6J8 313 aa16.37■□□□□ 0.21
DDX49-204ENST00000595858 MCF2P10911 925 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 BMP6P22004 513 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 DCAF4L1Q3SXM0 396 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 SLFN12LQ6IEE8 588 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 GUF1Q8N442 669 aaKnown RBP16.36■□□□□ 0.21
DDX49-204ENST00000595858 RNF169Q8NCN4 708 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 GBP3Q9H0R5 595 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
DDX49-204ENST00000595858 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 ZMYM2Q9UBW7 1377 aa16.36■□□□□ 0.21
DDX49-204ENST00000595858 TGFB1I1O43294 461 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 KIF20AO95235 890 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 ADSSP30520 456 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 PRCPP42785 496 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 MATR3P43243 847 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX49-204ENST00000595858 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX49-204ENST00000595858 COBLL1Q53SF7 1204 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 FAM109BQ6ICB4 259 aaPredicted RBP16.35■□□□□ 0.21
DDX49-204ENST00000595858 FAM117BQ6P1L5 589 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 TRIML1Q8N9V2 468 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 A0A0B4J269 797 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 MEIS3P2A8K0S8 358 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 GJB5O95377 273 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 AGMOQ6ZNB7 445 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
DDX49-204ENST00000595858 LPPQ93052 612 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 PGBD4Q96DM1 585 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
DDX49-204ENST00000595858 KCTD10Q9H3F6 313 aa16.35■□□□□ 0.21
DDX49-204ENST00000595858 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
DDX49-204ENST00000595858 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
DDX49-204ENST00000595858 A0A1W2PPC1 479 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 GRXCR1A8MXD5 290 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 DGKIO75912 1065 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 HARSP12081 509 aaKnown RBP16.34■□□□□ 0.21
DDX49-204ENST00000595858 ITGA4P13612 1032 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
DDX49-204ENST00000595858 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 CEP120Q8N960 986 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 POMGNT1Q8WZA1 660 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 ZBED2Q9BTP6 218 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 APOL6Q9BWW8 343 aa16.34■□□□□ 0.21
DDX49-204ENST00000595858 FGFR1P11362 822 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 GARTP22102 1010 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 GRM5P41594 1212 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.21
DDX49-204ENST00000595858 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 ADSSL1Q8N142 457 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 SYAP1Q96A49 352 aaPredicted RBP16.33■□□□□ 0.21
DDX49-204ENST00000595858 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 MSTO1Q9BUK6 570 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 RNF19AQ9NV58 838 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 SNTG2Q9NY99 539 aa16.33■□□□□ 0.21
DDX49-204ENST00000595858 AGO2Q9UKV8 859 aaKnown RBP16.33■□□□□ 0.21
DDX49-204ENST00000595858 OGTO15294 1046 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 AKAP5P24588 427 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 OSTNP61366 133 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 SEZ6Q53EL9 994 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 ZNF689Q96CS4 500 aaPredicted RBP16.33■□□□□ 0.2
DDX49-204ENST00000595858 CCDC94Q9BW85 323 aaPredicted RBP16.33■□□□□ 0.2
DDX49-204ENST00000595858 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.2
DDX49-204ENST00000595858 CGNQ9P2M7 1197 aaKnown RBP16.33■□□□□ 0.2
DDX49-204ENST00000595858 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
DDX49-204ENST00000595858 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 PDXKO00764 312 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 CLIC2O15247 247 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 HOXA2O43364 376 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 FAM189A1O60320 539 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
DDX49-204ENST00000595858 GATMP50440 423 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 RABGGTBP53611 331 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
DDX49-204ENST00000595858 CLLU1OSQ5K130 101 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 RAD9AQ99638 391 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 RSAD1Q9HA92 442 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 TRAF3IP3Q9Y228 551 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
DDX49-204ENST00000595858 PPP1R3GB7ZBB8 358 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 TLL1O43897 1013 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 OFD1O75665 1012 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 RECQL4O94761 1208 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 PPP1R2P41236 205 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 STIM1Q13586 685 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 KYAT1Q16773 422 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 ZBTB41Q5SVQ8 909 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms