RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 SPATC1LQ9H0A9 340 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 ST6GALNAC4Q9H4F1 302 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 SNX12Q9UMY4 172 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 ANKRD63C9JTQ0 380 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 PPP3CAQ08209 521 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 MTERF2Q49AM1 385 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 CCDC121Q6ZUS5 278 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 MAB21L3Q8N8X9 362 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 TSEN2Q8NCE0 465 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 RNF217Q8TC41 542 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 CENPHQ9H3R5 247 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 R3HDMLQ9H3Y0 253 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 FAM170AA1A519 330 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 F8VZ95 297 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 LRRN2O75325 713 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 ADSSP30520 456 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 STAT1P42224 750 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 DNA2P51530 1060 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 ALDH5A1P51649 535 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 DRAP1Q14919 205 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 NAB2Q15742 525 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 NAIF1Q69YI7 327 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 EEPD1Q7L9B9 569 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 CEP57Q86XR8 500 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 RNF10Q8N5U6 811 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 KIFAP3Q92845 792 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 BATF3Q9NR55 127 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 CYP26B1Q9NR63 512 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 APEX2Q9UBZ4 518 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 PFASO15067 1338 aa18.4■□□□□ 0.54
SHKBP1-205ENST00000594973 EVI5O60447 810 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 DKC1O60832 514 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PALMO75781 387 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PPATQ06203 517 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 IFT88Q13099 833 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 RIOX2Q8IUF8 465 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 CDCA5Q96FF9 252 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 ZIM3Q96PE6 472 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 STK33Q9BYT3 514 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 ASCC2Q9H1I8 757 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 MYH10P35580 1976 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 A0A0G2JLL6 359 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 DGAT1O75907 488 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 CNGA1P29973 690 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 MDH1P40925 334 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PRKCIP41743 596 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PHLDB3Q6NSJ2 640 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 ALKBH5Q6P6C2 394 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PRRT2Q7Z6L0 340 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 CBWD2Q8IUF1 395 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 C12orf56Q8IXR9 622 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 PLEKHO2Q8TD55 490 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 OSBPL9Q96SU4 736 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 XPNPEP1Q9NQW7 623 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 FBXO40Q9UH90 709 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 DMGDHQ9UI17 866 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 EXOC7Q9UPT5 735 aa18.39■□□□□ 0.53
SHKBP1-205ENST00000594973 ADGRA3Q8IWK6 1321 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 NR1D1P20393 614 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 SOX5P35711 763 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ATP1A2P50993 1020 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 CREG2Q8IUH2 290 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 MAP4K3Q8IVH8 894 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ANKRD13AQ8IZ07 590 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 IQCKQ8N0W5 287 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 P3H4Q92791 437 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 CCDC127Q96BQ5 260 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 LRRC1Q9BTT6 524 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 STIM2Q9P246 746 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 PCNTO95613 3336 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 SOWAHBA6NEL2 793 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 FTCDO95954 541 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ADRB2P07550 413 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 FERP16591 822 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 SNRNP35Q16560 246 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 GLE1Q53GS7 698 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 VPS36Q86VN1 386 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ARMC2Q8NEN0 867 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 TLR10Q9BXR5 811 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 GPR88Q9GZN0 384 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 ZNF302Q9NR11 478 aa18.38■□□□□ 0.53
SHKBP1-205ENST00000594973 GUCY1A3Q02108 690 aa18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 CETN1Q12798 172 aa18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 XKR3Q5GH77 459 aa18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 MREGQ8N565 214 aa18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 MCPH1Q8NEM0 835 aa18.37■□□□□ 0.53
SHKBP1-205ENST00000594973 LMO3Q8TAP4 145 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms