RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 FMNL3Q8IVF7 1028 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 ZSWIM2Q8NEG5 633 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 PARD3BQ8TEW8 1205 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 UPF3AQ9H1J1 476 aaKnown RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 MBLAC1A4D2B0 266 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 GOLGA6L9A6NEM1 432 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 UCHL3P15374 230 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 RFX1P22670 979 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 CYLC1P35663 651 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 ACOT2P49753 483 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 GPC3P51654 580 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 PRMT2P55345 433 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 IRX5P78411 483 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 RAPGEF1Q13905 1077 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 MEA1Q16626 185 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 ZNF568Q3ZCX4 644 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 MPZL3Q6UWV2 235 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 SRGAP1Q7Z6B7 1085 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 ZBTB45Q96K62 511 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 INTS2Q9H0H0 1204 aaKnown RBP16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 IFT122Q9HBG6 1241 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 TMEM8AQ9HCN3 771 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 FBXL5Q9UKA1 691 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 GINS2Q9Y248 185 aa16.19■□□□□ 0.18
GTF2F1-202ENST00000593678 LRRIQ3A6PVS8 624 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 NOL4O94818 638 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 ACTN1P12814 892 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 TNNI1P19237 187 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 CCND3P30281 292 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 CDK17Q00537 523 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 PSMD6Q15008 389 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 FAM187BQ17R55 369 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 E4F1Q66K89 784 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 APBB1IPQ7Z5R6 666 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 BAP1Q92560 729 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 SYN2Q92777 582 aaPredicted RBP16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 CCDC42Q96M95 316 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 GANQ9H2C0 597 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 PPP2R2CQ9Y2T4 447 aa16.18■□□□□ 0.18
GTF2F1-202ENST00000593678 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 MYADML2A6NDP7 307 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 OGTO15294 1046 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 PMM2O15305 246 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 HNRNPH3P31942 346 aaKnown RBP16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 MCL1Q07820 350 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 TDRD12Q587J7 1177 aaKnown RBP16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 CXCL17Q6UXB2 119 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 TOGARAM2Q6ZUX3 1019 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 RNF180Q86T96 592 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 CCDC170Q8IYT3 715 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 SLAIN1Q8ND83 568 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 EHBP1Q8NDI1 1231 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 MYO6Q9UM54 1294 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 TNFSF13BQ9Y275 285 aa16.17■□□□□ 0.18
GTF2F1-202ENST00000593678 EDN1P05305 212 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 CAP1Q01518 475 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 SURF1Q15526 300 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 PTPN14Q15678 1187 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 ASIC2Q16515 512 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 KIZQ2M2Z5 673 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 FAM47CQ5HY64 1035 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 TAF2Q6P1X5 1199 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 RAD9BQ6WBX8 426 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 PPP1R13BQ96KQ4 1090 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 C16orf45Q96MC5 204 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 MINDY3Q9H8M7 445 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 NHEJ1Q9H9Q4 299 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 APEX2Q9UBZ4 518 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 DDX20Q9UHI6 824 aaKnown RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 M0QZ92 97 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 TREHO43280 583 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 B4GALT5O43286 388 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 CCDC172P0C7W6 258 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 MCCD1P59942 119 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 NKX3-2P78367 333 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 KRT83P78385 493 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 TMEM62Q0P6H9 643 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 MTF1Q14872 753 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 KYAT1Q16773 422 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
GTF2F1-202ENST00000593678 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms