RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 HNRNPDLO14979 420 aaKnown RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 HOXA2O43364 376 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 OFD1O75665 1012 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 RHOBTB3O94955 611 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 MCF2P10911 925 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ITGA4P13612 1032 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 AKAP5P24588 427 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 LIG4P49917 911 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM4-216ENST00000592822 AFF1P51825 1210 aaKnown RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 TAP1Q03518 808 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 PSMD2Q13200 908 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 BTG3Q14201 252 aaPredicted RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 KCNB1Q14721 858 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 PAN2Q504Q3 1202 aaKnown RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 CMTR2Q8IYT2 770 aaKnown RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 CEP120Q8N960 986 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 SPATA20Q8TB22 786 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ZNF507Q8TCN5 953 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 SCFD1Q8WVM8 642 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ERCC4Q92889 916 aaPredicted RBP10.89□□□□□ -0.67
TPM4-216ENST00000592822 TIFAQ96CG3 184 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 BICD1Q96G01 975 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 CCDC34Q96HJ3 373 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 SLC39A2Q9NP94 309 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 SNTG2Q9NY99 539 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ANKFY1Q9P2R3 1169 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
TPM4-216ENST00000592822 LINC01553A4QN01 128 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 TBKBP1A7MCY6 615 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 GOLGA6L22H0YM25 854 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM4-216ENST00000592822 CLDN3O15551 220 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 GRM5P41594 1212 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 MCL1Q07820 350 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 NOLC1Q14978 699 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM4-216ENST00000592822 BMT2Q1RMZ1 405 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 LRRC55Q6ZSA7 311 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 STXBP4Q6ZWJ1 553 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 APBB1IPQ7Z5R6 666 aaPredicted RBP10.88□□□□□ -0.67
TPM4-216ENST00000592822 NLRC5Q86WI3 1866 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 HACE1Q8IYU2 909 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 ABI1Q8IZP0 508 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 CCDC47Q96A33 483 aaKnown RBP10.88□□□□□ -0.67
TPM4-216ENST00000592822 ZFP42Q96MM3 310 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 GAD1Q99259 594 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 CXCL16Q9H2A7 254 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 RSAD1Q9HA92 442 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 SLC28A3Q9HAS3 691 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
TPM4-216ENST00000592822 EXOC7Q9UPT5 735 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 MRPL42Q9Y6G3 142 aaKnown RBP10.88□□□□□ -0.67
TPM4-216ENST00000592822 STYXL1Q9Y6J8 313 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 TRANK1O15050 2925 aa10.88□□□□□ -0.67
TPM4-216ENST00000592822 SZT2Q5T011 3432 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 CITO14578 2027 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 UBE4BO95155 1302 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 RALGAPA2Q2PPJ7 1873 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 A0A0B4J269 797 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 ARL5CA6NH57 179 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 INPPL1O15357 1258 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 MEFVO15553 781 aaPredicted RBP10.87□□□□□ -0.67
TPM4-216ENST00000592822 FAM189A1O60320 539 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 RECQL4O94761 1208 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 SMC2O95347 1197 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 HARSP12081 509 aaKnown RBP10.87□□□□□ -0.67
TPM4-216ENST00000592822 ADSSP30520 456 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 MLH1P40692 756 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM4-216ENST00000592822 OSTNP61366 133 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 CAMK4Q16566 473 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 SEZ6Q53EL9 994 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 NOMO2Q5JPE7 1267 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 SLFN12LQ6IEE8 588 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 THNSL1Q8IYQ7 743 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 SYCP3Q8IZU3 236 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 FIBCD1Q8N539 461 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 GSTCDQ8NEC7 633 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 GSDMAQ96QA5 445 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 TTYH1Q9H313 450 aaPredicted RBP10.87□□□□□ -0.67
TPM4-216ENST00000592822 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
TPM4-216ENST00000592822 TMEM206Q9H813 350 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms