RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 URGCPQ8TCY9 931 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 EVI5LQ96CN4 794 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 PGBD4Q96DM1 585 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 MAP7D2Q96T17 732 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 HNRNPABQ99729 332 aaKnown RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 CLSTN3Q9BQT9 956 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 TRMT61BQ9BVS5 477 aaKnown RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 BRD9Q9H8M2 597 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 SENP2Q9HC62 589 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 GDE1Q9NZC3 331 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 DDX19BQ9UMR2 479 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 PCDHB2Q9Y5E7 798 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 PIAS3Q9Y6X2 628 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 GREB1Q4ZG55 1949 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 FREM2Q5SZK8 3169 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 A0A087WZ62 844 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 LNP1A1A4G5 178 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 MEIS1O00470 390 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 EXTL3O43909 919 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 C1QL1O75973 258 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 SEC24BO95487 1268 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 CAVIN2O95810 425 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 C8AP07357 584 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 PLA2G2AP14555 144 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 FCARP24071 287 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 DRP2Q13474 957 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 SLC5A9Q2M3M2 681 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 USP41Q3LFD5 358 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 PLK5Q496M5 336 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 PABPC1LQ4VXU2 614 aaKnown RBP7.3□□□□□ -1.24
DNMT1-222ENST00000590619 MIS18BP1Q6P0N0 1132 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 PRSS55Q6UWB4 352 aaPredicted RBP7.3□□□□□ -1.24
DNMT1-222ENST00000590619 CYB5R4Q7L1T6 521 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 IRF7Q92985 503 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 FDXACB1Q9BRP7 624 aaPredicted RBP7.3□□□□□ -1.24
DNMT1-222ENST00000590619 UBAC1Q9BSL1 405 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 GCOM2Q9BZD3 368 aaPredicted RBP7.3□□□□□ -1.24
DNMT1-222ENST00000590619 RSAD1Q9HA92 442 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 LY9Q9HBG7 655 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 ZFP14Q9HCL3 533 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 MRPS23Q9Y3D9 190 aaKnown RBP7.3□□□□□ -1.24
DNMT1-222ENST00000590619 LAMA1P25391 3075 aa7.3□□□□□ -1.24
DNMT1-222ENST00000590619 MTCL1Q9Y4B5 1905 aaKnown RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 CCDC163A0A0D9SF12 145 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 SPAARA0A1B0GVQ0 90 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 BCLAF3A2AJT9 711 aaKnown RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 ADAM12O43184 909 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 XYLBO75191 536 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 CCDC192P0DO97 292 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 GDI1P31150 447 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 HOXA9P31269 272 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 KIF5BP33176 963 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 RAB27AP51159 221 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 MLLT6P55198 1093 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 CREB5Q02930 508 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 DSC1Q08554 894 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 NMIQ13287 307 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 UVSSAQ2YD98 709 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 UAP1L1Q3KQV9 507 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 CEP55Q53EZ4 464 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 FAM78AQ5JUQ0 283 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 FUT10Q6P4F1 479 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 SCLT1Q96NL6 688 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 MKNK1Q9BUB5 465 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 COLEC11Q9BWP8 271 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 KRT23Q9C075 422 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 TMEM9BQ9NQ34 198 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 CEP131Q9UPN4 1083 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 PIN4Q9Y237 131 aaKnown RBP7.29□□□□□ -1.24
DNMT1-222ENST00000590619 RAI2Q9Y5P3 530 aa7.29□□□□□ -1.24
DNMT1-222ENST00000590619 NOTCH4Q99466 2003 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 URB1O60287 2271 aaKnown RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 SPDYE3A6NKU9 549 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 ARNTLO00327 626 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 MEFVO15553 781 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 RHOP08100 348 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 POU2F2P09086 479 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 PSMC3P17980 439 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 HOXA11P31270 313 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 VIPR2P41587 438 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 SOX9P48436 509 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 IRX4P78413 519 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 SIM1P81133 766 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 CDC42EP1Q00587 391 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 LRRC32Q14392 662 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 DGKKQ5KSL6 1271 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 RTP2Q5QGT7 225 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 AXDND1Q5T1B0 1012 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 LIN9Q5TKA1 542 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 TXNDC11Q6PKC3 985 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 VITQ6UXI7 678 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms