RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PCDHB18PQ96TA0 734 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
PDE4A-207ENST00000590407 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
PDE4A-207ENST00000590407 FSCN2O14926 492 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 P4HBP07237 508 aaKnown RBP13.3□□□□□ -0.28
PDE4A-207ENST00000590407 ARP10275 920 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 PYGMP11217 842 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 SLC8A1P32418 973 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 MARCKSL1P49006 195 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 MXI1P50539 228 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 RWDD2BP57060 319 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 GHRHRQ02643 423 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 RIPK1Q13546 671 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 AUHQ13825 339 aaKnown RBP13.3□□□□□ -0.28
PDE4A-207ENST00000590407 RASA3Q14644 834 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 CNGA2Q16280 664 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 ADAT2Q7Z6V5 191 aaKnown RBP13.3□□□□□ -0.28
PDE4A-207ENST00000590407 NLGN1Q8N2Q7 840 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 HSPBP1Q9NZL4 362 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 SAMD15Q9P1V8 674 aa13.3□□□□□ -0.28
PDE4A-207ENST00000590407 ECEL1O95672 775 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 OAS1P00973 400 aaKnown RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 RARAP10276 462 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 ATP5DP30049 168 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 PDE6CP51160 858 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 MFAP3P55082 362 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 DLG4P78352 724 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 IFI35P80217 286 aaPredicted RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 FMO1Q01740 532 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 CAV1Q03135 178 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 MESDQ14696 234 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
PDE4A-207ENST00000590407 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 PLCD4Q9BRC7 762 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 MCM8Q9UJA3 840 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 PCDHAC2Q9Y5I4 1007 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
PDE4A-207ENST00000590407 AFF2P51816 1311 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 SGPL1O95470 568 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 ITIH2P19823 946 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 GTF2H1P32780 548 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 GPC3P51654 580 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 HSD17B4P51659 736 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 NEDD9Q14511 834 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 AADACL2Q6P093 401 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
PDE4A-207ENST00000590407 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
PDE4A-207ENST00000590407 NUP85Q9BW27 656 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDE4A-207ENST00000590407 TPX2Q9ULW0 747 aaKnown RBP13.28□□□□□ -0.28
PDE4A-207ENST00000590407 SMCHD1A6NHR9 2005 aa13.28□□□□□ -0.28
PDE4A-207ENST00000590407 BACH1O14867 736 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 GCLMP48507 274 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 RARRES1P49788 294 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.28
PDE4A-207ENST00000590407 NCKAP1LP55160 1127 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 CDR2Q01850 454 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 PTP4A2Q12974 167 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 CALCOCO2Q13137 446 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 TNIP1Q15025 636 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.28
PDE4A-207ENST00000590407 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 MIER3Q7Z3K6 550 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 FAM228AQ86W67 206 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 GBP7Q8N8V2 638 aaPredicted RBP13.27□□□□□ -0.28
PDE4A-207ENST00000590407 PLEKHO2Q8TD55 490 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 TMC2Q8TDI7 906 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 FAM81BQ96LP2 452 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 CD248Q9HCU0 757 aa13.27□□□□□ -0.28
PDE4A-207ENST00000590407 AVENQ9NQS1 362 aaPredicted RBP13.27□□□□□ -0.28
PDE4A-207ENST00000590407 TLDC2A0PJX2 215 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 TP73O15350 636 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 SPOPO43791 374 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 ECE2O60344 883 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 SNX3O60493 162 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 ELF3P78545 371 aaPredicted RBP13.27□□□□□ -0.29
PDE4A-207ENST00000590407 PTK6Q13882 451 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 ENOSF1Q7L5Y1 443 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 EXOC3L1Q86VI1 746 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms