RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PTGDRQ13258 359 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 GRM2Q14416 872 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 UBE2SQ16763 222 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 SLC5A9Q2M3M2 681 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 MCMDC2Q4G0Z9 681 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 IFIT1BQ5T764 474 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 TANGO2Q6ICL3 276 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 PDXDC2PQ6P474 469 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 CASC1Q6TDU7 716 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 COLGALT2Q8IYK4 626 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 GAB3Q8WWW8 586 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 FAM3CQ92520 227 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 VPS45Q9NRW7 570 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 SSX2IPQ9Y2D8 614 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 FAN1Q9Y2M0 1017 aa6.9□□□□□ -1.3
VPS25-204ENST00000589577 PRG3Q9Y2Y8 225 aaPredicted RBP6.9□□□□□ -1.3
VPS25-204ENST00000589577 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.31
VPS25-204ENST00000589577 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.31
VPS25-204ENST00000589577 ATG2BQ96BY7 2078 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 DDX39AO00148 427 aaKnown RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 ARNTLO00327 626 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 CDX4O14627 284 aaPredicted RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 BACH1O14867 736 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 POMCP01189 267 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 ALDH2P05091 517 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS25-204ENST00000589577 PLA2G2AP14555 144 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 NT5C2P49902 561 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 DSC1Q08554 894 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 DRP2Q13474 957 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 FAM160B1Q5W0V3 765 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 TWF2Q6IBS0 349 aaKnown RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 SWSAP1Q6NVH7 229 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 EFCAB12Q6NXP0 572 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 CYB5R4Q7L1T6 521 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 TRMT1LQ7Z2T5 733 aaKnown RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 CUL5Q93034 780 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 MXRA8Q9BRK3 442 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 SDF4Q9BRK5 362 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 GPR62Q9BZJ7 368 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 ZNF302Q9NR11 478 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 CHST12Q9NRB3 414 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 FNIP2Q9P278 1114 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 DNMT3BQ9UBC3 853 aaKnown RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 PCDHGA5Q9Y5G8 931 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 MAFBQ9Y5Q3 323 aaPredicted RBP6.89□□□□□ -1.31
VPS25-204ENST00000589577 PIAS3Q9Y6X2 628 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 MYO16Q9Y6X6 1858 aa6.89□□□□□ -1.31
VPS25-204ENST00000589577 ABCA7Q8IZY2 2146 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PTPRBP23467 1997 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 ZNF213O14771 459 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 ADAM12O43184 909 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 RPP40O75818 363 aaKnown RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 C8AP07357 584 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 CEBPBP17676 345 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 CCNE1P24864 410 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 HOXA9P31269 272 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PXNP49023 591 aaPredicted RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PRSS55Q6UWB4 352 aaPredicted RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 CACNA2D4Q7Z3S7 1137 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 DEFB124Q8NES8 71 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 URGCPQ8TCY9 931 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 NLRP7Q8WX94 980 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 ELSPBP1Q96BH3 223 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 MCRS1Q96EZ8 462 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 CRELD1Q96HD1 420 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 ZC3H10Q96K80 434 aaKnown RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 UBAC1Q9BSL1 405 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 ZNF334Q9HCZ1 680 aaPredicted RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 TRPV5Q9NQA5 729 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 KCNH3Q9ULD8 1083 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PCDHA6Q9UN73 950 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PIN4Q9Y237 131 aaKnown RBP6.88□□□□□ -1.31
VPS25-204ENST00000589577 PCDHB2Q9Y5E7 798 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 PCDHA8Q9Y5H6 950 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 MGAQ8IWI9 3026 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 THADAQ6YHU6 1953 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 ADAMTS9Q9P2N4 1935 aa6.88□□□□□ -1.31
VPS25-204ENST00000589577 HIP1O00291 1037 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 MEIS1O00470 390 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 MAGEB2O15479 319 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 EXTL3O43909 919 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 ZNF862O60290 1169 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 POU2F2P09086 479 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 SKIP12755 728 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 OR1G1P47890 313 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 RAB27AP51159 221 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PDE1AP54750 535 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 FGD1P98174 961 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms