RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MYH11P35749 1972 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 MYPNQ86TC9 1320 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 PASKQ96RG2 1323 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 IGSF9BQ9UPX0 1349 aa7.71□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF233A6NK53 670 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PHF20L1A8MW92 1017 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 WNT10BO00744 389 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 BACH1O14867 736 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 SLC16A4O15374 487 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 SPOPO43791 374 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 LRRN2O75325 713 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 CYP1A2P05177 515 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 EIF2AK2P19525 551 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ATP5DP30049 168 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 MDH1P40925 334 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 GCLMP48507 274 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 AP3M2P53677 418 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 RWDD2BP57060 319 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 RPS6P62753 249 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 CDR2Q01850 454 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 GCNT1Q02742 428 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 CAV1Q03135 178 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 CXCL9Q07325 125 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 STRN3Q13033 797 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ITGB3BPQ13352 177 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 DRP2Q13474 957 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 SNRNP35Q16560 246 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 DENND2CQ68D51 928 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 NSMFQ6X4W1 530 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 APOBEC3FQ8IUX4 373 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PPM1KQ8N3J5 372 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 BBOF1Q8ND07 529 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 SMC1BQ8NDV3 1235 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF564Q8TBZ8 553 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 POMGNT1Q8WZA1 660 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 P3H4Q92791 437 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ARL8AQ96BM9 186 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 BICD1Q96G01 975 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 CEP170P1Q96L14 293 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 C12orf42Q96LP6 360 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 MFSD14AQ96MC6 490 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 FBXL18Q96ME1 805 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 TAAR1Q96RJ0 339 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 MPHOSPH6Q99547 160 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PAGR1Q9BTK6 254 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 AP1M1Q9BXS5 423 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 TMEM117Q9H0C3 514 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 DDX47Q9H0S4 455 aaKnown RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 THAP2Q9H0W7 228 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 RPAP3Q9H6T3 665 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 AVENQ9NQS1 362 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 RNF146Q9NTX7 359 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 TMOD4Q9NZQ9 345 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PKD2L1Q9P0L9 805 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 WRAP73Q9P2S5 460 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PCYOX1Q9UHG3 505 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PGAP2Q9UHJ9 254 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 PPP2R3BQ9Y5P8 575 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ALG6Q9Y672 507 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ASTN2O75129 1339 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-228ENST00000588781 SBF1O95248 1867 aa7.7□□□□□ -1.18
SPIDR-228ENST00000588781 ESYT3A0FGR9 886 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 TESPA1A2RU30 521 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DENND3A2RUS2 1198 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 VWA5AO00534 786 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ATP2A1O14983 1001 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ZBTB39O15060 712 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 TTI1O43156 1089 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DAPK3O43293 454 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 EXTL3O43909 919 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 NR3C2P08235 984 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 FAM153BP0C7A2 387 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DPEP1P16444 411 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 VCAM1P19320 739 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 TBXAS1P24557 533 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CNGA1P29973 690 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 RDXP35241 583 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 NPTX2P47972 431 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CCT5P48643 541 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 BACE1P56817 501 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 PPP2R2AP63151 447 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 MRPS9P82933 396 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CYP24A1Q07973 514 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 PPP3CAQ08209 521 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DHX9Q08211 1270 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ADCY2Q08462 1091 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CALCOCO2Q13137 446 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 MESDQ14696 234 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 SURF1Q15526 300 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CYP1B1Q16678 543 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 FAM153CQ494X1 144 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DALRD3Q5D0E6 543 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 XKR3Q5GH77 459 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 DUPD1Q68J44 220 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms