RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MIER3Q7Z3K6 550 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
SDF2-204ENST00000587338 CEP89Q96ST8 783 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 RIT2Q99578 217 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 KXD1Q9BQD3 176 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 DDX23Q9BUQ8 820 aaKnown RBP9.57□□□□□ -0.88
SDF2-204ENST00000587338 C22orf23Q9BZE7 217 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 OSBPL6Q9BZF3 934 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 ZMYND12Q9H0C1 365 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 IFT122Q9HBG6 1241 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.57□□□□□ -0.88
SDF2-204ENST00000587338 RAB23Q9ULC3 237 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 COL4A3BPQ9Y5P4 624 aa9.57□□□□□ -0.88
SDF2-204ENST00000587338 KLF18A0A0U1RQI7 1052 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 TBC1D4O60343 1298 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 MAFO75444 373 aaPredicted RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 NR1I2O75469 434 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 STBD1O95210 358 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 EFEMP2O95967 443 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 SRGAP2CP0DJJ0 459 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 NCLP19338 710 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 TGM1P22735 817 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 TARSP26639 723 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 CDC27P30260 824 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 HOXA11P31270 313 aaPredicted RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 ANP32AP39687 249 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 PFKPQ01813 784 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 CREMQ03060 361 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 DSC1Q08554 894 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 SPEM2Q0P670 501 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 USP41Q3LFD5 358 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 FUT10Q6P4F1 479 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 LILRA6Q6PI73 481 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 SLC5A5Q92911 643 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 FGF13Q92913 245 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 GAD1Q99259 594 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 JPH2Q9BR39 696 aaPredicted RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 PHF20Q9BVI0 1012 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 APOL6Q9BWW8 343 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 MINDY3Q9H8M7 445 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 UBN1Q9NPG3 1134 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 PRMT8Q9NR22 394 aaPredicted RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 CHST7Q9NS84 486 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 RALYQ9UKM9 306 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 POLIQ9UNA4 740 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 HES2Q9Y543 173 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.56□□□□□ -0.88
SDF2-204ENST00000587338 DOCK6Q96HP0 2047 aa9.56□□□□□ -0.88
SDF2-204ENST00000587338 F5P12259 2224 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 CCL16O15467 120 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 ERLIN2O94905 339 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 C1RP00736 705 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 GNA11P29992 359 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 MTAPQ13126 283 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 PRSS55Q6UWB4 352 aaPredicted RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 RSPO2Q6UXX9 243 aaPredicted RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 ANO5Q75V66 913 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 SRGAP1Q7Z6B7 1085 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 CNNM3Q8NE01 707 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 RDM1Q8NG50 284 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 ITFG1Q8TB96 612 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 NETO1Q8TDF5 533 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 PSPC1Q8WXF1 523 aaKnown RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 SLC7A3Q8WY07 619 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 NELL1Q92832 810 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 TMEM143Q96AN5 459 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 CLDN23Q96B33 292 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 EIF2AQ9BY44 585 aaKnown RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 BMP2KQ9NSY1 1161 aaPredicted RBP9.55□□□□□ -0.88
SDF2-204ENST00000587338 FNIP2Q9P278 1114 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 FBXW11Q9UKB1 542 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 IPPQ9Y573 584 aa9.55□□□□□ -0.88
SDF2-204ENST00000587338 MTCL1Q9Y4B5 1905 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 SLC30A4O14863 429 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 NCAM2O15394 837 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 XYLBO75191 536 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 PSMD10O75832 226 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 C8AP07357 584 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
SDF2-204ENST00000587338 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 RPS9P46781 194 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 NPEPPSP55786 919 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 DMWDQ09019 674 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 LAMTOR4Q0VGL1 99 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 RTP2Q5QGT7 225 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 LAIR1Q6GTX8 287 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 ZNF852Q6ZMS4 543 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms