RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 MINDY3Q9H8M7 445 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 MRPL44Q9H9J2 332 aaKnown RBP17.69■□□□□ 0.42
ATG4D-205ENST00000586477 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
ATG4D-205ENST00000586477 GPRC5CQ9NQ84 441 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 PLAGL2Q9UPG8 496 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 RWDD3Q9Y3V2 267 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 PCDHA5Q9Y5H7 936 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 TBKBP1A7MCY6 615 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 NPTX2P47972 431 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-205ENST00000586477 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
ATG4D-205ENST00000586477 COL19A1Q14993 1142 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 KMT5BQ4FZB7 885 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 TCEAL5Q5H9L2 206 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 CLLU1OSQ5K130 101 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 RBM43Q6ZSC3 357 aaKnown RBP17.68■□□□□ 0.42
ATG4D-205ENST00000586477 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-205ENST00000586477 RNF149Q8NC42 400 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 KCNN1Q92952 543 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 P2RX5Q93086 422 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 NLRP4Q96MN2 994 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 CASD1Q96PB1 797 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 C11orf84Q9BUA3 381 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-205ENST00000586477 PLVAPQ9BX97 442 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 ST6GALNAC4Q9H4F1 302 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 C5orf42Q9H799 3197 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 UBE4BO95155 1302 aa17.68■□□□□ 0.42
ATG4D-205ENST00000586477 A0A0U1RQF3 1178 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 K7ENM7 598 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 SRGAP2CP0DJJ0 459 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 STRN3Q13033 797 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 STIM1Q13586 685 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 CAPSQ13938 189 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 PTPROQ16827 1216 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 CDCA2Q69YH5 1023 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-205ENST00000586477 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 KLHL23Q8NBE8 558 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 UBE2ZQ9H832 354 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-205ENST00000586477 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
ATG4D-205ENST00000586477 DACH1Q9UI36 760 aa17.67■□□□□ 0.42
ATG4D-205ENST00000586477 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 EIF3DO15371 548 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATG4D-205ENST00000586477 KLRC4O43908 158 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-205ENST00000586477 SFPQP23246 707 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATG4D-205ENST00000586477 CASP1P29466 404 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 NCKAP1LP55160 1127 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 PTENP60484 403 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 EHHADHQ08426 723 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 MAPK6Q16659 721 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 ZNF658Q5TYW1 1059 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-205ENST00000586477 PRIMPOLQ96LW4 560 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 NECAB3Q96P71 396 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-205ENST00000586477 TRAIPQ9BWF2 469 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 TMEM134Q9H6X4 195 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 EXOC7Q9UPT5 735 aa17.66■□□□□ 0.42
ATG4D-205ENST00000586477 MEIS3P2A8K0S8 358 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 K7ERI5 159 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 GCNT3O95395 438 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 HOXA11P31270 313 aaPredicted RBP17.65■□□□□ 0.42
ATG4D-205ENST00000586477 IRS1P35568 1242 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 ZNF720Q7Z2F6 126 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 HAUS6Q7Z4H7 955 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 TMEM117Q9H0C3 514 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 NSUN3Q9H649 340 aaKnown RBP17.65■□□□□ 0.42
ATG4D-205ENST00000586477 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 CHST12Q9NRB3 414 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 PRMT7Q9NVM4 692 aaPredicted RBP17.65■□□□□ 0.42
ATG4D-205ENST00000586477 ARHGAP28Q9P2N2 729 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 PCDHGC5Q9Y5F6 944 aa17.65■□□□□ 0.42
ATG4D-205ENST00000586477 SLC16A4O15374 487 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 ERLIN2O94905 339 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 CSPG5O95196 566 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 GTF2F1P35269 517 aaKnown RBP eCLIP17.64■□□□□ 0.41
ATG4D-205ENST00000586477 LTBRP36941 435 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 HYAL1Q12794 435 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 HSP90AA2PQ14568 343 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-205ENST00000586477 COBLL1Q53SF7 1204 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 APBB1IPQ7Z5R6 666 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-205ENST00000586477 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 BSNDQ8WZ55 320 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 LPPQ93052 612 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 AGPAT5Q9NUQ2 364 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 MAN1B1Q9UKM7 699 aa17.64■□□□□ 0.41
ATG4D-205ENST00000586477 PIN4Q9Y237 131 aaKnown RBP17.64■□□□□ 0.41
ATG4D-205ENST00000586477 INO80B-WBP1J3KQ70 363 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 EOMESO95936 686 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 GTF2BQ00403 316 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 MORC3Q14149 939 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 CTC1Q2NKJ3 1217 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms