RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 GAS7O60861 476 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 MED24O75448 989 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 GSTA2P09210 222 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 CHN1P15882 459 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 RAD23BP54727 409 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 PSMC6P62333 389 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 AMPD3Q01432 767 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 STK4Q13043 487 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 BAATQ14032 418 aaPredicted RBP11.06□□□□□ -0.64
TIMP2-204ENST00000586057 RNF10Q8N5U6 811 aaKnown RBP11.06□□□□□ -0.64
TIMP2-204ENST00000586057 ZNF507Q8TCN5 953 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 THAP9Q9H5L6 903 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 PREBQ9HCU5 417 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 BLOC1S4Q9NUP1 217 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
TIMP2-204ENST00000586057 POLR2AP24928 1970 aaKnown RBP11.06□□□□□ -0.64
TIMP2-204ENST00000586057 ZBTB39O15060 712 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 GNAZP19086 355 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 CDK17Q00537 523 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 TREML2Q5T2D2 321 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 RNF207Q6ZRF8 634 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 DDX12PQ92771 950 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 ZNF577Q9BSK1 485 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 VCX3BQ9H321 246 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 VCX3AQ9NNX9 186 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 KBTBD4Q9NVX7 518 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 GGT7Q9UJ14 662 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 MYH10P35580 1976 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 EML1O00423 815 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 SART1O43290 800 aaKnown RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 ACADSP16219 412 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 CALB2P22676 271 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PEX5P50542 639 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 DNA2P51530 1060 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 BNIP1Q12981 228 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 COG2Q14746 738 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 OR52E8Q6IFG1 317 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 SESTD1Q86VW0 696 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 SLFN12Q8IYM2 578 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 NOX5Q96PH1 765 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 RMDN3Q96TC7 470 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 SELENOSQ9BQE4 189 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 YIPF2Q9BWQ6 316 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 TMCO1Q9UM00 188 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 BRCA1P38398 1863 aaKnown RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 LGR5O75473 907 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 EEF1GP26641 437 aaKnown RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 CEP55Q53EZ4 464 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 ARHGEF16Q5VV41 709 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 DNAJC14Q6Y2X3 702 aaPredicted RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 GPBP1Q86WP2 473 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 KLHL7Q8IXQ5 586 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 RAD54LQ92698 747 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PBKQ96KB5 322 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
TIMP2-204ENST00000586057 TCEAL9Q9UHQ7 104 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
TIMP2-204ENST00000586057 PSME4Q14997 1843 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ARMCX6Q7L4S7 300 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 CATSPER3Q86XQ3 398 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 GLIS3Q8NEA6 775 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 DNAJC9Q8WXX5 260 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 LENG9Q96B70 501 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 TLCD1Q96CP7 247 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 RAB3IPQ96QF0 476 aaPredicted RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 NAP1L4Q99733 375 aaKnown RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 TTYH3Q9C0H2 523 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 NKX1-2Q9UD57 310 aaPredicted RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ZNF112Q9UJU3 913 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 SNCAIPQ9Y6H5 919 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 AKR1B10O60218 316 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 PMS1P54277 932 aaKnown RBP11.04□□□□□ -0.64
TIMP2-204ENST00000586057 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 IRGCQ6NXR0 463 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 IRF2BP1Q8IU81 584 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 NELFCDQ8IXH7 590 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
TIMP2-204ENST00000586057 ETNPPLQ8TBG4 499 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms