RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 USP37Q86T82 979 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ZNF598Q86UK7 904 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ADSSL1Q8N142 457 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 KIAA0895Q8NCT3 520 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 PPP1R16BQ96T49 567 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 RAD9AQ99638 391 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 MRPL9Q9BYD2 267 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 NAT10Q9H0A0 1025 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 PRO3102Q9H379 93 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 PDZD7Q9H5P4 517 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 AGO2Q9UKV8 859 aaKnown RBP10.18□□□□□ -0.78
UBBP4-201ENST00000583708 LRFN2Q9ULH4 789 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 INSL6Q9Y581 213 aa10.18□□□□□ -0.78
UBBP4-201ENST00000583708 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.17□□□□□ -0.78
UBBP4-201ENST00000583708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ABLIM1O14639 778 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 B4GALT5O43286 388 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 EXTL3O43909 919 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 GJB5O95377 273 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ACRP10323 421 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ITGA4P13612 1032 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 FGFR4P22455 802 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 CCNE1P24864 410 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 PRCPP42785 496 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 CASP5P51878 434 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
UBBP4-201ENST00000583708 FKBP3Q00688 224 aaKnown RBP10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ZNF568Q3ZCX4 644 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 UBXN11Q5T124 520 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 GLB1LQ6UWU2 654 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 TDHQ8IZJ6 230 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 POMGNT1Q8WZA1 660 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
UBBP4-201ENST00000583708 FBXL18Q96ME1 805 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 MKNK1Q9BUB5 465 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 KCTD10Q9H3F6 313 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ASB7Q9H672 318 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 DMAC2Q9NW81 257 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 STK39Q9UEW8 545 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 DERAQ9Y315 318 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 MYH11P35749 1972 aa10.17□□□□□ -0.78
UBBP4-201ENST00000583708 ZNF233A6NK53 670 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CETN3O15182 167 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 TGFB1I1O43294 461 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 XPOTO43592 962 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 MGEA5O60502 916 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 DGKIO75912 1065 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 IL18RAPO95256 599 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 GNA14O95837 355 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CCDC192P0DO97 292 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 ATP2A2P16615 1042 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 HOXD13P35453 343 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 AP3M2P53677 418 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 EPHB4P54760 987 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 HTRA4P83105 476 aaPredicted RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 SMAD3P84022 425 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 SHHQ15465 462 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 RAB30Q15771 203 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 LRIT3Q3SXY7 679 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 XKR4Q5GH76 650 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 ARMCX5Q6P1M9 558 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 HERC6Q8IVU3 1022 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CMTR2Q8IYT2 770 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 ABI1Q8IZP0 508 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 XXYLT1Q8NBI6 393 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 URGCPQ8TCY9 931 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
UBBP4-201ENST00000583708 P2RX5Q93086 422 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CPB2Q96IY4 423 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CEP63Q96MT8 703 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 SAMD11Q96NU1 681 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 OSBPL7Q9BZF2 842 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 CDT1Q9H211 546 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 AGPAT3Q9NRZ7 376 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 SLC38A7Q9NVC3 462 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 RWDD2AQ9UIY3 292 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 RWDD3Q9Y3V2 267 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 IPPQ9Y573 584 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 PCDHA11Q9Y5I1 949 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 TTC3P53804 2025 aa10.16□□□□□ -0.78
UBBP4-201ENST00000583708 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 ANKRD63C9JTQ0 380 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 NPTXRO95502 500 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 KCNE1P15382 129 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 ADSSP30520 456 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 PAK1Q13153 545 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 STX1AQ16623 288 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 ZCWPW2Q504Y3 356 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 EEF1DP3Q658K8 133 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms