RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 TNFSF13BQ9Y275 285 aa13.22□□□□□ -0.29
SNRPD1-204ENST00000582475 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
SNRPD1-204ENST00000582475 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 SOX1O00570 391 aaPredicted RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 DGKIO75912 1065 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 GCNT3O95395 438 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 MYBP10242 640 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 DPYDQ12882 1025 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 POSTNQ15063 836 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 EEF1DP3Q658K8 133 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 SMG8Q8ND04 991 aaKnown RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 YME1L1Q96TA2 773 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 PTPRHQ9HD43 1115 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 YBX2Q9Y2T7 364 aaKnown RBP13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 IPPQ9Y573 584 aa13.21□□□□□ -0.29
SNRPD1-204ENST00000582475 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 HOXA2O43364 376 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 RPN1P04843 607 aaKnown RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ITGA4P13612 1032 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 LIG4P49917 911 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 FOXK1P85037 733 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 EHHADHQ08426 723 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 PSMD2Q13200 908 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ALCAMQ13740 583 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 DCAF4L1Q3SXM0 396 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 FAM26FQ5R3K3 315 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 L1TD1Q5T7N2 865 aaKnown RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ZPBP2Q6X784 338 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 STXBP4Q6ZWJ1 553 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 LPPQ93052 612 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 BICD1Q96G01 975 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 NKX2-4Q9H2Z4 354 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 EXOC1Q9NV70 894 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
SNRPD1-204ENST00000582475 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 CLDN3O15551 220 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 TOM1L1O75674 476 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 PIGRP01833 764 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 FGFR1P11362 822 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 PROZP22891 400 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 DNAJB2P25686 324 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 GATMP50440 423 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 CASP5P51878 434 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 KCNA1Q09470 495 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 PNOCQ13519 176 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 MAP4K3Q8IVH8 894 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 CASD1Q96PB1 797 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 APOL6Q9BWW8 343 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 TMEM117Q9H0C3 514 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 PARP2Q9UGN5 583 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 HES2Q9Y543 173 aa13.19□□□□□ -0.3
SNRPD1-204ENST00000582475 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 ABLIM1O14639 778 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 OFD1O75665 1012 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 SMC2O95347 1197 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 CA3P07451 260 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 MCF2P10911 925 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 AKAP5P24588 427 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 MATR3P43243 847 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 STK4Q13043 487 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 DSG2Q14126 1118 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 KCNB1Q14721 858 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms