RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 GARTP22102 1010 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 PON1P27169 355 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 HNRNPH3P31942 346 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 BMP8BP34820 402 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 STAT1P42224 750 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 MAGEA1P43355 309 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 ACLYP53396 1101 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 TUBB2AQ13885 445 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 KCNA10Q16322 511 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 KLHDC7AQ5VTJ3 777 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 TLK2Q86UE8 772 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 GPD1LQ8N335 351 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 SLC35C1Q96A29 364 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 TCHPQ9BT92 498 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 TUBB2BQ9BVA1 445 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 KIFC3Q9BVG8 833 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 IFIH1Q9BYX4 1025 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 UPF3AQ9H1J1 476 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 TMEM134Q9H6X4 195 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 PDLIM7Q9NR12 457 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 PDGFCQ9NRA1 345 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 GUCA1BQ9UMX6 200 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 ZMYM2Q9UBW7 1377 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 MKI67P46013 3256 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 EMSYQ7Z589 1322 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 A0A1W2PQ45 241 aaPredicted RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 A0A1W2PQY0 241 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 DYNC1I1O14576 645 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TLR3O15455 904 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 MAGEB2O15479 319 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 DYNC1LI2O43237 492 aaPredicted RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 TACC1O75410 805 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 ARIH2O95376 493 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 ASGR1P07306 291 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TRIM49P0CI25 452 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TRIM49CP0CI26 452 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SRGAP2CP0DJJ0 459 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 UCHL3P15374 230 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SYN1P17600 705 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 ATP4AP20648 1035 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 RFX1P22670 979 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 ARL2P36404 184 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 CPT1AP50416 773 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 KIF11P52732 1056 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 IGBP1P78318 339 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SNX17Q15036 470 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 PLCB4Q15147 1175 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SNRNP35Q16560 246 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 FSCN1Q16658 493 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 HSDL1Q3SXM5 330 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 WDR44Q5JSH3 913 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 C10orf76Q5T2E6 689 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 WDR59Q6PJI9 974 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 KLHDC9Q8NEP7 349 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 PRPF31Q8WWY3 499 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 COPS5Q92905 334 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 CCDC127Q96BQ5 260 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SAAL1Q96ER3 474 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 SCLT1Q96NL6 688 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 PCYT2Q99447 389 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 CBWD1Q9BRT8 395 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 UBE2OQ9C0C9 1292 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 INTS2Q9H0H0 1204 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 XPNPEP1Q9NQW7 623 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 SUCLA2Q9P2R7 463 aaPredicted RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 FBXL5Q9UKA1 691 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 AGO2Q9UKV8 859 aaKnown RBP10.07□□□□□ -0.8
SS18-220ENST00000582092 PCDHA13Q9Y5I0 950 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
SS18-220ENST00000582092 A0A0U1RQG5 324 aaPredicted RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 ANKRD63C9JTQ0 380 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 EXTL3O43909 919 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 KPNA6O60684 536 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 SLU7O95391 586 aaKnown RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 ACTN1P12814 892 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 GLRA2P23416 452 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 GTF2H1P32780 548 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MXI1P50539 228 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 VAV2P52735 878 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MFAP3P55082 362 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 NKX3-2P78367 333 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
SS18-220ENST00000582092 MAPK6Q16659 721 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 DGKDQ16760 1214 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 TRIM60Q495X7 471 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 TAPT1Q6NXT6 567 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 TRIM65Q6PJ69 517 aa10.06□□□□□ -0.8
SS18-220ENST00000582092 PPTC7Q8NI37 304 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms