RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 HDAC6Q9UBN7 1215 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 AGO2Q9UKV8 859 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 NENFQ9UMX5 172 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TANC1Q9C0D5 1861 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 KAT6AQ92794 2004 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 HNRNPDLO14979 420 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 ZC3H11AO75152 810 aaKnown RBP eCLIP6.95□□□□□ -1.3
RTTN-204ENST00000579986 C4BPAP04003 597 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 MYL3P08590 195 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 DARSP14868 501 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 CAPN2P17655 700 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 AXLP30530 894 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 CYP2J2P51589 502 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 CRYBB1P53674 252 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 AP3M2P53677 418 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 LRMPQ12912 555 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 KCNA10Q16322 511 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 XKR4Q5GH76 650 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 BRSK2Q8IWQ3 736 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 CCDC155Q8N6L0 562 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 EHBP1Q8NDI1 1231 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 CXorf38Q8TB03 319 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ZNF516Q92618 1163 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TSPAN18Q96SJ8 248 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 SYT11Q9BT88 431 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TARS2Q9BW92 718 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 TMEM117Q9H0C3 514 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TMEM8AQ9HCN3 771 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 SQORQ9Y6N5 450 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TRIP12Q14669 1992 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 A0A087WZ62 844 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ZNF233A6NK53 670 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ESPNB1AK53 854 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 RBAK-RBAKDNI3L0D1 243 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 OGTO15294 1046 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ARHGAP6O43182 974 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TREHO43280 583 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ASGR1P07306 291 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 GRK4P32298 578 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 LIG4P49917 911 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 CDK7P50613 346 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 WNT7BP56706 349 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 NLRP11P59045 1033 aaKnown RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 NBPF20Q3BBV1 942 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ATF7IP2Q5U623 682 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 GDF6Q6KF10 455 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TRIM65Q6PJ69 517 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 ALKAL1Q6UXT8 129 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 OR8K1Q8NGG5 319 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 RAET1EQ8TD07 263 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
RTTN-204ENST00000579986 CRISPLD2Q9H0B8 497 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 SPC25Q9HBM1 224 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 PTCH2Q9Y6C5 1203 aa6.95□□□□□ -1.3
RTTN-204ENST00000579986 B4GALT4O60513 344 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ANXA13P27216 316 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PRKCIP41743 596 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ACLYP53396 1101 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PTK7Q13308 1070 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PRPF4BQ13523 1007 aaKnown RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 PTPN21Q16825 1174 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ZACNQ401N2 412 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 GNASQ5JWF2 1037 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 E4F1Q66K89 784 aaPredicted RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 GBP6Q6ZN66 633 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PPFIBP1Q86W92 1011 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 POMGNT1Q8WZA1 660 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 VTI1AQ96AJ9 217 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ZBTB45Q96K62 511 aaPredicted RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 MAP7D2Q96T17 732 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 CGRRF1Q99675 332 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 AGPAT5Q9NUQ2 364 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 OGDHLQ9ULD0 1010 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 B4GALT5O43286 388 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 PGK1P00558 417 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 VTNP04004 478 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 C6orf222P0C671 652 aaPredicted RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 SRGAP2CP0DJJ0 459 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 CYP2C9P11712 490 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 SKILP12757 684 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 UCHL3P15374 230 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ARF4P18085 180 aaPredicted RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 ADKP55263 362 aaKnown RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 C1QTNF8P60827 252 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 NOLC1Q14978 699 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTTN-204ENST00000579986 SURF1Q15526 300 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 EXOC3L4Q17RC7 722 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 ZBTB41Q5SVQ8 909 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 C1orf53Q5VUE5 145 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 TRMT1LQ7Z2T5 733 aaKnown RBP6.94□□□□□ -1.3
RTTN-204ENST00000579986 RNF180Q86T96 592 aa6.94□□□□□ -1.3
RTTN-204ENST00000579986 TMTC1Q8IUR5 882 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms