RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 CAMK2BQ13554 666 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TDGQ13569 410 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 GIT2Q14161 759 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 MCM6Q14566 821 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 EMC2Q15006 297 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 AMHR2Q16671 573 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 KIAA0319Q5VV43 1072 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 CPLX2Q6PUV4 134 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 MOXD1Q6UVY6 613 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PRSS55Q6UWB4 352 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 OTUD6AQ7L8S5 288 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 KRT25Q7Z3Z0 450 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 FRMD5Q7Z6J6 570 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 NEK8Q86SG6 692 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 GPR149Q86SP6 731 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 FERMT3Q86UX7 667 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 CEP57Q86XR8 500 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 C4orf19Q8IY42 314 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 UBALD2Q8IYN6 164 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 SIX5Q8N196 739 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 ZNF710Q8N1W2 664 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 HASPINQ8TF76 798 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TCP11Q8WWU5 503 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PSPC1Q8WXF1 523 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 SLC7A3Q8WY07 619 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 RIN2Q8WYP3 895 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 ACSF2Q96CM8 615 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 PCMTD1Q96MG8 357 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 FAM20AQ96MK3 541 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 NECTIN4Q96NY8 510 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 MYADMQ96S97 322 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 MTRQ99707 1265 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PRRX2Q99811 253 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PAAF1Q9BRP4 392 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 LXNQ9BS40 222 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 RPP25Q9BUL9 199 aaKnown RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 COLEC11Q9BWP8 271 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 EMILIN2Q9BXX0 1053 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 C22orf23Q9BZE7 217 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 GPR62Q9BZJ7 368 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 SFXN1Q9H9B4 322 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 KCNK12Q9HB15 430 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PIDD1Q9HB75 910 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 GPRC5CQ9NQ84 441 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 XPNPEP1Q9NQW7 623 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 MAN1C1Q9NR34 630 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 DZANK1Q9NVP4 752 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 MARCH5Q9NX47 278 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 ORC3Q9UBD5 711 aaPredicted RBP4.28□□□□□ -1.72
NUP85-209ENST00000578987 PARP2Q9UGN5 583 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 FBXL21Q9UKT6 434 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 CA14Q9ULX7 337 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PCDHA12Q9UN75 941 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 IRAK3Q9Y616 596 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TCHHQ07283 1943 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TICRRQ7Z2Z1 1910 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 PATJQ8NI35 1801 aa4.28□□□□□ -1.72
NUP85-209ENST00000578987 TTLL13PA6NNM8 815 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 BTBD18B2RXH4 712 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TGM5O43548 720 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TSPAN1O60635 241 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 PFKFB2O60825 505 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 DKC1O60832 514 aaKnown RBP eCLIP4.27□□□□□ -1.73
NUP85-209ENST00000578987 LRRN2O75325 713 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TADA2AO75478 443 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 SOD2P04179 222 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 URODP06132 367 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 DCNP07585 359 aaKnown RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 GLRA2P23416 452 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 KRT2P35908 639 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 MLH1P40692 756 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 RFC5P40937 340 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 MLLT3P42568 568 aaPredicted RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 RAB27AP51159 221 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 CLCN5P51795 746 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 PTENP60484 403 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 NTHL1P78549 312 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 MBTD1Q05BQ5 628 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 SPIRE1Q08AE8 756 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 CAPSQ13938 189 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 ME3Q16798 604 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 SPECC1Q5M775 1068 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 CWF19L1Q69YN2 538 aaKnown RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 PPP4R3AQ6IN85 833 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 GALNT17Q6IS24 598 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 CCDC149Q6ZUS6 474 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 PPFIBP1Q86W92 1011 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 NOSTRINQ8IVI9 506 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 DTWD2Q8NBA8 298 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 GSTCDQ8NEC7 633 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 ASAP3Q8TDY4 903 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 RPS6KC1Q96S38 1066 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 JPH2Q9BR39 696 aaPredicted RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 TMEM175Q9BSA9 504 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TM6SF1Q9BZW5 370 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TRIM6Q9C030 488 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms