RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 ENTPD7Q9NQZ7 604 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 RWDD2AQ9UIY3 292 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 NOC2LQ9Y3T9 749 aaKnown RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
SS18-210ENST00000578700 CHMP2AO43633 222 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 NRDCO43847 1150 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 PSMD10O75832 226 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 PLA2G4BP0C869 781 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 IDEP14735 1019 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 EPHA7Q15375 998 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 ANKRD54Q6NXT1 300 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 MIER3Q7Z3K6 550 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 CATSPER3Q86XQ3 398 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 NME8Q8N427 588 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
SS18-210ENST00000578700 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
SS18-210ENST00000578700 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
SS18-210ENST00000578700 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 MTRQ99707 1265 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 EIF2AK1Q9BQI3 630 aaKnown RBP11.18□□□□□ -0.62
SS18-210ENST00000578700 S1PR5Q9H228 398 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 ST3GAL5Q9UNP4 418 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 SAMM50Q9Y512 469 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 EVPLQ92817 2033 aa11.18□□□□□ -0.62
SS18-210ENST00000578700 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 BACH1O14867 736 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
SS18-210ENST00000578700 MED24O75448 989 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 TPM2P07951 284 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 ARP10275 920 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 SFNP31947 248 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 JAK3P52333 1124 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 UBASH3AP57075 661 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 ACTR2P61160 394 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 FANCCQ00597 558 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 NCAPHQ15003 741 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 PDE12Q6L8Q7 609 aaKnown RBP11.17□□□□□ -0.62
SS18-210ENST00000578700 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 ADSSL1Q8N142 457 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 DDX12PQ92771 950 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
SS18-210ENST00000578700 RGS18Q9NS28 235 aa11.17□□□□□ -0.62
SS18-210ENST00000578700 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
SS18-210ENST00000578700 MYMKA6NI61 221 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 E9PMD0 336 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 GPR182O15218 404 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
SS18-210ENST00000578700 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
SS18-210ENST00000578700 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
SS18-210ENST00000578700 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 LAG3P18627 525 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 PBX3P40426 434 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 STX17P56962 302 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 GSDMDP57764 484 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 KIZQ2M2Z5 673 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
SS18-210ENST00000578700 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 TMEM40Q8WWA1 233 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 OSMRQ99650 979 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 TSG101Q99816 390 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
SS18-210ENST00000578700 CWH43Q9H720 699 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms