RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 MBTD1Q05BQ5 628 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 ANGPT1Q15389 498 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 MTSS1LQ765P7 747 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 APBB1IPQ7Z5R6 666 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 MINDY3Q9H8M7 445 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 N4BP3O15049 544 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 B4GALT3O60512 393 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 ZMYND10O75800 440 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 KRT2P35908 639 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 AMHR2Q16671 573 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 ZNF528Q3MIS6 628 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 HSD17B14Q9BPX1 270 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 A0A1B0GUA9 196 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 POMCP01189 267 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 AK2P54819 239 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 GJA10Q969M2 543 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 TUFT1Q9NNX1 390 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 KCNH3Q9ULD8 1083 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 SLITRK3O94933 977 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 STARD6P59095 220 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 PRKCQQ04759 706 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 TUSC3Q13454 348 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 FRMD5Q7Z6J6 570 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 SIX5Q8N196 739 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 FLCNQ8NFG4 579 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 GAD1Q99259 594 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 AVENQ9NQS1 362 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 WRAP73Q9P2S5 460 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 FBXW11Q9UKB1 542 aa12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-214ENST00000578112 LAMP2P13473 410 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 MLH1P40692 756 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 HTR4Q13639 388 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 CAPSQ13938 189 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 ZBTB8OSQ8IWT0 167 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 TNFRSF25Q93038 417 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 UROC1Q96N76 676 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 IER2Q9BTL4 223 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 PIDD1Q9HB75 910 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.41
SMARCE1-214ENST00000578112 INO80B-WBP1J3KQ70 363 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 RFX1P22670 979 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 SCNN1GP51170 649 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 PFKPQ01813 784 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 SCRN1Q12765 414 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 PIK3AP1Q6ZUJ8 805 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 EIF2AQ9BY44 585 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 FBXO4Q9UKT5 387 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 TGM5O43548 720 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 XYLBO75191 536 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 SDHBP21912 280 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 RARRES1P49788 294 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 DCAF4L1Q3SXM0 396 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 MYADMQ96S97 322 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 FZD8Q9H461 694 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 MAFFQ9ULX9 164 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 KCNJ14Q9UNX9 436 aa12.45□□□□□ -0.42
SMARCE1-214ENST00000578112 SSBP05455 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 GLRA2P23416 452 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 FSHRP23945 695 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 ID4P47928 161 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 CALCRLQ16602 461 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 TPH2Q8IWU9 490 aa12.44□□□□□ -0.42
SMARCE1-214ENST00000578112 ASAP3Q8TDY4 903 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms