RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	MRPL4	Q9BYD3	311 aa	Known RBP	11.9	□□□□□ -0.5
SLC12A4-215	ENST00000575857	IPP	Q9Y573	584 aa		11.9	□□□□□ -0.5
SLC12A4-215	ENST00000575857	INSL6	Q9Y581	213 aa		11.9	□□□□□ -0.5
SLC12A4-215	ENST00000575857	PCDHB7	Q9Y5E2	793 aa		11.9	□□□□□ -0.5
SLC12A4-215	ENST00000575857	MYH11	P35749	1972 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	NPTXR	O95502	500 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MYB	P10242	640 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	KCNA1	Q09470	495 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	STRN3	Q13033	797 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	SLC39A4	Q6P5W5	647 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	AGMO	Q6ZNB7	445 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	CMTR2	Q8IYT2	770 aa	Known RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	LPP	Q93052	612 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HVCN1	Q96D96	273 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZBTB45	Q96K62	511 aa	Predicted RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	YME1L1	Q96TA2	773 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZBED2	Q9BTP6	218 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HAPLN2	Q9GZV7	340 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	CDT1	Q9H211	546 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RNF39	Q9H2S5	420 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	IKZF4	Q9H2S9	585 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MRPL44	Q9H9J2	332 aa	Known RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	LMBRD1	Q9NUN5	540 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RNF216	Q9NWF9	866 aa	Predicted RBP	11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TBC1D7	Q9P0N9	293 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HES2	Q9Y543	173 aa		11.89	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	LINC01553	A4QN01	128 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	INPPL1	O15357	1258 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	OFD1	O75665	1012 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TOM1L1	O75674	476 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	GCNT3	O95395	438 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	BMP1	P13497	986 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	IBSP	P21815	317 aa	Predicted RBP	11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ABCD1	P33897	745 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HOXD13	P35453	343 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TAP1	Q03518	808 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MCL1	Q07820	350 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ALCAM	Q13740	583 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	DCAF4L1	Q3SXM0	396 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	KMT5B	Q4FZB7	885 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	FAM26F	Q5R3K3	315 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	L1TD1	Q5T7N2	865 aa	Known RBP	11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	KANK3	Q6NY19	840 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	SPATA20	Q8TB22	786 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	PGBD4	Q96DM1	585 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	CASD1	Q96PB1	797 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TMEM117	Q9H0C3	514 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	NXF3	Q9H4D5	531 aa	Known RBP	11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	LRFN2	Q9ULH4	789 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	GBF1	Q92538	1859 aa		11.88	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ANKRD63	C9JTQ0	380 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HOXA2	O43364	376 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	FAM189A1	O60320	539 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	PRPF6	O94906	941 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RPN1	P04843	607 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MCF2	P10911	925 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	AFF1	P51825	1210 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	POSTN	Q15063	836 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	SKIV2L	Q15477	1246 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	BMT2	Q1RMZ1	405 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MPZL3	Q6UWV2	235 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	LRRC55	Q6ZSA7	311 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	CEP120	Q8N960	986 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RNF169	Q8NCN4	708 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	KIAA0895	Q8NCT3	520 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	GSTCD	Q8NEC7	633 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZNF507	Q8TCN5	953 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	HELQ	Q8TDG4	1101 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	SCFD1	Q8WVM8	642 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	CLP1	Q92989	425 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	GBP4	Q96PP9	640 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	PCDHB13	Q9Y5F0	798 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MTCH2	Q9Y6C9	303 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MRPL42	Q9Y6G3	142 aa	Known RBP	11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	STYXL1	Q9Y6J8	313 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZMYM2	Q9UBW7	1377 aa		11.87	□□□□□ -0.51
SLC12A4-215	ENST00000575857		A0A0B4J269	797 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TBKBP1	A7MCY6	615 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TISP43	B9A030	160 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	EIF3D	O15371	548 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	MEFV	O15553	781 aa	Predicted RBP	11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RHOBTB3	O94955	611 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ITGA4	P13612	1032 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ADSS	P30520	456 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	GRM5	P41594	1212 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ERVK-21	P61565	698 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	STK4	Q13043	487 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	PNOC	Q13519	176 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	BTG3	Q14201	252 aa	Predicted RBP	11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	KCNB1	Q14721	858 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	TMEM132A	Q24JP5	1023 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ZNF568	Q3ZCX4	644 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	PAN2	Q504Q3	1202 aa	Known RBP	11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ARNTL2	Q8WYA1	636 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	RSPH1	Q8WYR4	309 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ACCS	Q96QU6	501 aa		11.86	□□□□□ -0.51
SLC12A4-215	ENST00000575857	ADPGK	Q9BRR6	497 aa		11.86	□□□□□ -0.51

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