RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 ESYT2A0FGR8 921 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ATMINO43313 823 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 TTC4O95801 387 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 GIT2Q14161 759 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 EPM2AIP1Q7L775 607 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 ARHGAP22Q7Z5H3 698 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 SLC20A1Q8WUM9 679 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 INPP5DQ92835 1189 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 SYT11Q9BT88 431 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMG6-215ENST00000574501 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 USP20Q9Y2K6 914 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 SH3BP1Q9Y3L3 701 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 USH1CQ9Y6N9 552 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ASTN1O14525 1302 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 SHANK3Q9BYB0 1731 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 BCL9O00512 1426 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ATP9AO75110 1047 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 EYA4O95677 639 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 FTLP02792 175 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 EVA1CP58658 441 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 IL9RQ01113 521 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 KRT17Q04695 432 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 CUL3Q13618 768 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ZC3H12AQ5D1E8 599 aaKnown RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 WASHC2DQ5SRD0 308 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 HYIQ5T013 277 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ZNF746Q6NUN9 644 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 IRGCQ6NXR0 463 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 ZC3H18Q86VM9 953 aaKnown RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 SLC13A5Q86YT5 568 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 CCNJLQ8IV13 435 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 NRG4Q8WWG1 115 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 REEP2Q9BRK0 252 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 DCLRE1BQ9H816 532 aa15.42■□□□□ 0.06
SMG6-215ENST00000574501 G3BP2Q9UN86 482 aaKnown RBP15.42■□□□□ 0.06
SMG6-215ENST00000574501 MIF4GDA9UHW6 222 aaKnown RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 PDXKO00764 312 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 GCNT3O95395 438 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 BAG3O95817 575 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 HIBADHP31937 336 aaKnown RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 VPS41P49754 854 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 SIX1Q15475 284 aaPredicted RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 ZC2HC1CQ53FD0 456 aaPredicted RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 TAF1BQ53T94 588 aaPredicted RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 TMEM63BQ5T3F8 832 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 RNF207Q6ZRF8 634 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 SCG3Q8WXD2 468 aaKnown RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 IFT43Q96FT9 208 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 DNAJC18Q9H819 358 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 METTL14Q9HCE5 456 aaKnown RBP15.41■□□□□ 0.06
SMG6-215ENST00000574501 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 SIGLEC16A6NMB1 481 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 SFI1A8K8P3 1242 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 RASA4BC9J798 803 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 RASA4O43374 803 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 VHLP40337 213 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 SNX30Q5VWJ9 437 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 C7orf43Q8WVR3 580 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 STARD13Q9Y3M8 1113 aa15.41■□□□□ 0.06
SMG6-215ENST00000574501 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 KCNA3P22001 575 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 ITGA8P53708 1063 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 MOGSQ13724 837 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 RCN1Q15293 331 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 TMED2Q15363 201 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 CBWD6Q4V339 395 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 CBWD3Q5JTY5 395 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 CBWD5Q5RIA9 395 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 DSTYKQ6XUX3 929 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 PPP1R21Q6ZMI0 780 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 RHOT2Q8IXI1 618 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 GPCPD1Q9NPB8 672 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 NINJ2Q9NZG7 142 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 STOML1Q9UBI4 398 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
SMG6-215ENST00000574501 ADGRA3Q8IWK6 1321 aa15.4■□□□□ 0.06
SMG6-215ENST00000574501 FOXN3O00409 490 aaPredicted RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 CLDN3O15551 220 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 MARK3P27448 753 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 CDK8P49336 464 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 USP4Q13107 963 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 CYP1B1Q16678 543 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 TXNRD3Q86VQ6 643 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 DTX3LQ8TDB6 740 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms