RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ELF1P32519 619 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 FMO5P49326 533 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ITKQ08881 620 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 CCNJLQ8IV13 435 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 EML4Q9HC35 981 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 GGA2Q9UJY4 613 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 MMP14P50281 582 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 KRT17Q04695 432 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 HIC1Q14526 733 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 CEP55Q53EZ4 464 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 NCAPG2Q86XI2 1143 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ACTRT1Q8TDG2 376 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 TTC36A6NLP5 189 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 H3BRJ5 948 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ARHGEF6Q15052 776 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 IL1RAPL1Q9NZN1 696 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 MTSS1O43312 755 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 RPA1P27694 616 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 GCLMP48507 274 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 BCAR1P56945 870 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 PDE1CQ14123 709 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 P3H1Q32P28 736 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 RSRC2Q7L4I2 434 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 BEST2Q8NFU1 509 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 ATP6V1E2Q96A05 226 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 CFAP36Q96G28 342 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 CD163L1Q9NR16 1453 aa13.12□□□□□ -0.31
PCDHGA9-201ENST00000573521 GTF2H1P32780 548 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 IFNA8P32881 189 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 INPP1P49441 399 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GPC3P51654 580 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 RAD23BP54727 409 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GALCP54803 685 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 AP1B1Q10567 949 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 HEATR6Q6AI08 1181 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GLYCTKQ8IVS8 523 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 ACAP3Q96P50 834 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CHP1Q99653 195 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 AKT3Q9Y243 479 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 SNX5Q9Y5X3 404 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GNAT1P11488 350 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 PPP4CP60510 307 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 PDIA2Q13087 525 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GPS1Q13098 491 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CRYMQ14894 314 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 HAUS6Q7Z4H7 955 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 PROCA1Q8NCQ7 364 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 LPAR1Q92633 364 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 PABPC3Q9H361 631 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 AMACRQ9UHK6 382 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 MYOM1P52179 1685 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CRKP46108 304 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 ANTXR2P58335 489 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CDKAL1Q5VV42 579 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 TMCO5AQ8N6Q1 288 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 CNTNAP5Q8WYK1 1306 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 ENTPD3O75355 529 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 GZMAP12544 262 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms