RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 MRPS17Q9Y2R5 130 aaKnown RBP12.68□□□□□ -0.38
CHMP6-202ENST00000571457 MYH15Q9Y2K3 1946 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 TMEM150BA6NC51 233 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 XYLBO75191 536 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 ERLIN2O94905 339 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 ADD1P35611 737 aaKnown RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 PSMC5P62195 406 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 LIN9Q5TKA1 542 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 GRASPQ7Z6J2 395 aaPredicted RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 NELL1Q92832 810 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 CCDC51Q96ER9 411 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 MBOAT7Q96N66 472 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 GAD1Q99259 594 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
CHMP6-202ENST00000571457 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 LTB4R2Q9NPC1 389 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 ANO2Q9NQ90 1003 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
CHMP6-202ENST00000571457 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ASAP2O43150 1006 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
CHMP6-202ENST00000571457 SRGAP2CP0DJJ0 459 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 AXLP30530 894 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 HOXA9P31269 272 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 MLH1P40692 756 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 NRLP54845 237 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 FGD1P98174 961 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 LAMTOR4Q0VGL1 99 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 Q4G0T1 1027 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 NOTUMQ6P988 496 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ANO5Q75V66 913 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ST13P5Q8NFI4 369 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-202ENST00000571457 PRPF31Q8WWY3 499 aaKnown RBP12.66□□□□□ -0.38
CHMP6-202ENST00000571457 FGF13Q92913 245 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 MINDY3Q9H8M7 445 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 FBXW11Q9UKB1 542 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 ADAM28Q9UKQ2 775 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 MTF2Q9Y483 593 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-202ENST00000571457 IPPQ9Y573 584 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 PATJQ8NI35 1801 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
CHMP6-202ENST00000571457 LRP3O75074 770 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 TADA2AO75478 443 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 TGM1P22735 817 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 RFC5P40937 340 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 SCNN1GP51170 649 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 PPP2R5DQ14738 602 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 PPM1LQ5SGD2 360 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 TCP11Q8WWU5 503 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 GJA10Q969M2 543 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
CHMP6-202ENST00000571457 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
CHMP6-202ENST00000571457 PRMT8Q9NR22 394 aaPredicted RBP12.65□□□□□ -0.38
CHMP6-202ENST00000571457 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 ZFYVE26Q68DK2 2539 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 F8W810 466 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 RPL17P18621 184 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 CD72P21854 359 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 KRT32Q14532 448 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 LAIR1Q6GTX8 287 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 TPRG1Q6ZUI0 275 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 CEP170P1Q96L14 293 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 DHX33Q9H6R0 707 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 KCNH3Q9ULD8 1083 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
CHMP6-202ENST00000571457 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
CHMP6-202ENST00000571457 CYP3A7-CYP3A51PA0A087WV96 503 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 SLC30A4O14863 429 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 EDIL3O43854 480 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 FOXD2O60548 495 aaPredicted RBP12.63□□□□□ -0.39
CHMP6-202ENST00000571457 C8AP07357 584 aa12.63□□□□□ -0.39
CHMP6-202ENST00000571457 POU2F2P09086 479 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms