RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 EIF2AQ9BY44 585 aaKnown RBP15.94■□□□□ 0.14
CIITA-205ENST00000571186 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
CIITA-205ENST00000571186 RXFP1Q9HBX9 757 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 MIOSQ9NXC5 875 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 RGL1Q9NZL6 768 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 HES2Q9Y543 173 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 PPME1Q9Y570 386 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 IPPQ9Y573 584 aa15.94■□□□□ 0.14
CIITA-205ENST00000571186 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 F8W810 466 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 ZBTB39O15060 712 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 CD2BP2O95400 341 aaKnown RBP15.93■□□□□ 0.14
CIITA-205ENST00000571186 MLH1P40692 756 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 SCNN1GP51170 649 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 EMC2Q15006 297 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 EPHA7Q15375 998 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 NOTUMQ6P988 496 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 GLYCTKQ8IVS8 523 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 C4orf19Q8IY42 314 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 NXPE3Q969Y0 559 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 LXNQ9BS40 222 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 KCNMB3Q9NPA1 279 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 EPS15L1Q9UBC2 864 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 FANCMQ8IYD8 2048 aa15.93■□□□□ 0.14
CIITA-205ENST00000571186 MIA3Q5JRA6 1907 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 MYH15Q9Y2K3 1946 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 INO80B-WBP1J3KQ70 363 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 CCNT1O60563 726 aaKnown RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 TSPAN1O60635 241 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 SRFP11831 508 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 AXLP30530 894 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 PTENP60484 403 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 DSG1Q02413 1049 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 DSC1Q08554 894 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 CTTNQ14247 550 aaKnown RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 RABEP1Q15276 862 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 SPECC1Q5M775 1068 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 PPP4R3AQ6IN85 833 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 NEK8Q86SG6 692 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 FAM177A1Q8N128 213 aaPredicted RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 HDAC7Q8WUI4 952 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 ZNF707Q96C28 371 aaPredicted RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 DYDC2Q96IM9 177 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 B3GALT6Q96L58 329 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 MTRQ99707 1265 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 RHOBTB2Q9BYZ6 727 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
CIITA-205ENST00000571186 NT5C3AQ9H0P0 336 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 PLEKHA4Q9H4M7 779 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 TBC1D17Q9HA65 648 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 R4GN57 208 aa15.92■□□□□ 0.14
CIITA-205ENST00000571186 CACNA1AO00555 2505 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 EFEMP2O95967 443 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 LMNAP02545 664 aaKnown RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 DCNP07585 359 aaKnown RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 GCFC2P16383 781 aaKnown RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 CYP4A11Q02928 519 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 MXD4Q14582 209 aaPredicted RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 TPH2Q8IWU9 490 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 HACE1Q8IYU2 909 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 ST13P5Q8NFI4 369 aaPredicted RBP15.91■□□□□ 0.14
CIITA-205ENST00000571186 GPR152Q8TDT2 470 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 HAS1Q92839 578 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 CCDC51Q96ER9 411 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 GPR62Q9BZJ7 368 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 SEMA4AQ9H3S1 761 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 ZSWIM4Q9H7M6 989 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
CIITA-205ENST00000571186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.91■□□□□ 0.14
CIITA-205ENST00000571186 FAM205CA6NFA0 338 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 TGM5O43548 720 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 BAG4O95429 457 aaKnown RBP15.9■□□□□ 0.14
CIITA-205ENST00000571186 LAMP2P13473 410 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 RPL17P18621 184 aaKnown RBP15.9■□□□□ 0.14
CIITA-205ENST00000571186 AKAP5P24588 427 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 TFDP1Q14186 410 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 PCBP1Q15365 356 aaKnown RBP eCLIP15.9■□□□□ 0.14
CIITA-205ENST00000571186 USP41Q3LFD5 358 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 EARS2Q5JPH6 523 aaKnown RBP15.9■□□□□ 0.14
CIITA-205ENST00000571186 FUT10Q6P4F1 479 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 PIK3AP1Q6ZUJ8 805 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 GET4Q7L5D6 327 aaPredicted RBP15.9■□□□□ 0.14
CIITA-205ENST00000571186 WASF1Q92558 559 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 RABGGTAQ92696 567 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 ZSCAN31Q96LW9 406 aaPredicted RBP15.9■□□□□ 0.14
CIITA-205ENST00000571186 PRKD2Q9BZL6 878 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.9■□□□□ 0.14
CIITA-205ENST00000571186 ZDHHC7Q9NXF8 308 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 GIT1Q9Y2X7 761 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 SIT1Q9Y3P8 196 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 OTOGLQ3ZCN5 2332 aa15.9■□□□□ 0.14
CIITA-205ENST00000571186 TRIP11Q15643 1979 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms