RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 UNC45AQ9H3U1 944 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 NCOA5Q9HCD5 579 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 NGRNQ9NPE2 291 aaKnown RBP7.3□□□□□ -1.24
SMG6-204ENST00000570606 RNF19AQ9NV58 838 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 TOR4AQ9NXH8 423 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 DACT1Q9NYF0 836 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SPG21Q9NZD8 308 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 SNX14Q9Y5W7 946 aa7.3□□□□□ -1.24
SMG6-204ENST00000570606 FAM186AA6NE01 2351 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 CPLX1O14810 134 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 ICMTO60725 284 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 ZC3H11AO75152 810 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMG6-204ENST00000570606 REC8O95072 547 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 IFNAR1P17181 557 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 HSPA4P34932 840 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 DNM2P50570 870 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 FAM189BP81408 668 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 SSRP1Q08945 709 aaKnown RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 ZNF211Q13398 564 aaPredicted RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 PTPN21Q16825 1174 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 TWF2Q6IBS0 349 aaKnown RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 CES5AQ6NT32 575 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 LRRC55Q6ZSA7 311 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 SLC39A11Q8N1S5 342 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 FBXL6Q8N531 539 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 PRSS33Q8NF86 280 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 RDM1Q8NG50 284 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 TBCKQ8TEA7 893 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 SLC5A5Q92911 643 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 GJA10Q969M2 543 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 TMEM169Q96HH4 297 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 RIT2Q99578 217 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 PRRX2Q99811 253 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 GCOM2Q9BZD3 368 aaPredicted RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 SH3GLB2Q9NR46 395 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 PIN4Q9Y237 131 aaKnown RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 INPP5FQ9Y2H2 1132 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 DENND4AQ7Z401 1863 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 RIF1Q5UIP0 2472 aaKnown RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 C2orf16Q68DN1 1984 aa7.29□□□□□ -1.24
SMG6-204ENST00000570606 PTPRZ1P23471 2315 aaPredicted RBP7.29□□□□□ -1.24
SMG6-204ENST00000570606 A0A087WZ62 844 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 A0A0U1RQF3 1178 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 TMEM150BA6NC51 233 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 C2orf71A6NGG8 1288 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 NT5C1B-RDH14C9J2C7 533 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 CSDE1O75534 798 aaKnown RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 ZIC2O95409 532 aaPredicted RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 TDP2O95551 362 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 ABL1P00519 1130 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 TIMP2P16035 220 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 HOXB8P17481 243 aaPredicted RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 ALDH7A1P49419 539 aaKnown RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 USP11P51784 963 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 BCAR1P56945 870 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 RNASELQ05823 741 aaKnown RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 CLN3Q13286 438 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 DRP2Q13474 957 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 NTRK3Q16288 839 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 ECM1Q16610 540 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 LONRF3Q496Y0 759 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 XKR3Q5GH77 459 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 SYCE2Q6PIF2 218 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 CPLX2Q6PUV4 134 aaKnown RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 GLB1LQ6UWU2 654 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 CATSPER4Q7RTX7 472 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 BMP8AQ7Z5Y6 402 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 ZNF410Q86VK4 478 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 RHPN2Q8IUC4 686 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 SLC9A9Q8IVB4 645 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 KCNB2Q92953 911 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 NLRP4Q96MN2 994 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 NECTIN4Q96NY8 510 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 SH2D3AQ9BRG2 576 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 FDXACB1Q9BRP7 624 aaPredicted RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 AGXT2Q9BYV1 514 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 DZANK1Q9NVP4 752 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 PCDHA4Q9UN74 947 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 HCFC2Q9Y5Z7 792 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 USP3Q9Y6I4 520 aa7.28□□□□□ -1.24
SMG6-204ENST00000570606 TDRD15B5MCY1 1934 aaKnown RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 ZFHX2Q9C0A1 2572 aaPredicted RBP7.28□□□□□ -1.24
SMG6-204ENST00000570606 USP34Q70CQ2 3546 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 SPTBN4Q9H254 2564 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 CLASP2O75122 1294 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 PSMD10O75832 226 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 DEXIO95424 95 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 EOMESO95936 686 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PDIA3P30101 505 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 MTHFRP42898 656 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PTGIRP43119 386 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PHKA2P46019 1235 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms