RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GPR152Q8TDT2 470 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 MTRQ99707 1265 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 TBC1D17Q9HA65 648 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
CAPN3-220ENST00000569827 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
CAPN3-220ENST00000569827 MYH11P35749 1972 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 WNT7AO00755 349 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 TGM5O43548 720 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 LRRN2O75325 713 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 NPTXRO95502 500 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 EFEMP2O95967 443 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 ARF4P18085 180 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-220ENST00000569827 PTENP60484 403 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 NTHL1P78549 312 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 DSC1Q08554 894 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 NR5A1Q13285 461 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 CAPSQ13938 189 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 EPHA7Q15375 998 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 C4orf19Q8IY42 314 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 CMASQ8NFW8 434 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-220ENST00000569827 RSPH1Q8WYR4 309 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 FAM20AQ96MK3 541 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 RPP25Q9BUL9 199 aaKnown RBP13.44□□□□□ -0.26
CAPN3-220ENST00000569827 CXCL16Q9H2A7 254 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
CAPN3-220ENST00000569827 REC8O95072 547 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 DSG1Q02413 1049 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 PDCD11Q14690 1871 aaKnown RBP13.43□□□□□ -0.26
CAPN3-220ENST00000569827 AMHR2Q16671 573 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 NOTUMQ6P988 496 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 GSTCDQ8NEC7 633 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 KCNG4Q8TDN1 519 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 ZNF274Q96GC6 653 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-220ENST00000569827 RTP3Q9BQQ7 232 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 FOXQ1Q9C009 403 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-220ENST00000569827 CSRNP2Q9H175 543 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 USP20Q9Y2K6 914 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
CAPN3-220ENST00000569827 RALGAPA1Q6GYQ0 2036 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 ANK1P16157 1881 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 NCOR2Q9Y618 2525 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 CARNS1A5YM72 827 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 CASTOR2A6NHX0 329 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 POTEMA6NI47 508 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 TTLL13PA6NNM8 815 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 GAS2O43903 313 aaKnown RBP13.42□□□□□ -0.26
CAPN3-220ENST00000569827 DKC1O60832 514 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN3-220ENST00000569827 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 GLRA2P23416 452 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 ID4P47928 161 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
CAPN3-220ENST00000569827 OTUD6AQ7L8S5 288 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 EIF2AK1Q9BQI3 630 aaKnown RBP13.42□□□□□ -0.26
CAPN3-220ENST00000569827 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 EPS15L1Q9UBC2 864 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 PARP2Q9UGN5 583 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 NUMBLQ9Y6R0 609 aa13.42□□□□□ -0.26
CAPN3-220ENST00000569827 USO1O60763 962 aaKnown RBP13.41□□□□□ -0.26
CAPN3-220ENST00000569827 SLITRK3O94933 977 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
CAPN3-220ENST00000569827 IGFBP6P24592 240 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-220ENST00000569827 HTR4Q13639 388 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 GRASPQ7Z6J2 395 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-220ENST00000569827 KIAA2013Q8IYS2 634 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 STAMQ92783 540 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-220ENST00000569827 ARHGEF3Q9NR81 526 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 CHST7Q9NS84 486 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
CAPN3-220ENST00000569827 LRRIQ4A6NIV6 560 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 CCL16O15467 120 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 ASAP2O43150 1006 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 ADAM12O43184 909 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 LARGE1O95461 756 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 SRFP11831 508 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 LAMP2P13473 410 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 GLULP15104 373 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 LIG1P18858 919 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 ARL2P36404 184 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 TFDP1Q14186 410 aa13.4□□□□□ -0.26
CAPN3-220ENST00000569827 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms